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@DeepLabCut

DeepLabCut

DeepLabCut, a software package for animal pose estimation. Created by the A. and M.W. Mathis Labs

Welcome to the DeepLabCut Organization! 👋

🙋‍♀️ DeepLabCut™ is an efficient method for 2D and 3D markerless pose estimation based on transfer learning with deep neural networks.

We also have several key code repositories that may be of interest:

  • DLC-Live! & DLC-Live! GUI -- export your trained DeepLabCut model and run it for live analysis. Consider using our easy GUI to do so.
  • DLCUtils -- this repo hosts some code and key links to helper packages that input the outputs of DeepLabCut for downstream analysis.
  • DLC Workshop & Educational Materials -- learn about how to use and develop with DeepLabCut!
  • DLC2Kinematics -- use this code to load DeepLabCut (H5) files for movement analysis, dev. by MW Mathis Lab.
  • CEBRA -- use this code to load DeepLabCut (H5) files for advnced nonlinear embedding analysis and joint modeling, dev. by MW Mathis Lab.

🌈 Contribution guidelines to this project can be found here!

🍿 Find more resources, our papers, and examples on the main website!

🧙 Check out the repos below to find helper code, additional tools, and more!

Pinned

  1. DeepLabCut DeepLabCut Public

    Official implementation of DeepLabCut: Markerless pose estimation of user-defined features with deep learning for all animals incl. humans

    Python 4.3k 1.6k

  2. DeepLabCut-live DeepLabCut-live Public

    SDK for running DeepLabCut on a live video stream

    Python 176 51

  3. DeepLabCut-Workshop-Materials DeepLabCut-Workshop-Materials Public

    Workshop material for using DeepLabCut

    Jupyter Notebook 136 37

  4. DLCutils DLCutils Public

    Various scripts to support deeplabcut and what to do afterwards!

    Jupyter Notebook 137 64

  5. DeepLabCut-live-GUI DeepLabCut-live-GUI Public

    GUI to run DeepLabCut on live video feed

    Python 52 20

  6. Primer-MotionCapture Primer-MotionCapture Public

    A Primer on Motion Capture with Deep Learning:Principles, Pitfalls and Perspectives

    Jupyter Notebook 22 6

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