merge with developmental #10
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-Rdoc clarifies that the subjects directory is not the root's "subjects" directory but the output of the preprocessing pipeline. - For RStudio (or other instances), FREESURFER_HOME may not be retrievable from the system environment as it does not inherit its variables. An optional argument (fshomepath) is given to specify the path to FreeSurfer. Using this path, FreeSurfer's environment will be set up again from within R.
installing an older version of vtk because vtk 9.4.0 is problematic
typo in previous commit
…conda path, accounting for OS
…executable for Miniconda installation, adapted the OS. -Another fix for the custom installation of Miniconda: packages were being installed in a new environment instead of the installation path chosen by the user
…s dependency Cleaner global options management
…g subsequent issues)
…replaces its version with 1.26.4 upon brainstat's installation
… typo fixed in "Python troubleshooting" Rrsp added for Python troubleshooting vignette, News page updated for 1.2.0 release
…les could not be found at all. It also will get rid of the sublist.txt which was outputted automatically if subj_ID was set to FALSE.
-added choice to make an ephemeral environment as per reticulate's new py_require() system -fixes silenced messages when installing miniconda -fixes vtk installation whe installing python alone
…od (since version 1.41.0) as the first recommended Python installation method as part of VWR updated 1.2.1.
…imported python functions)
…flicting with CRAN Debian check. The requirement should already be established with the NAMESPACE file anyways. Also not accounting for fourth level as is already being increased.
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