Skip to content

Issues: Clinical-Genomics/scout

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

182 Open 2,581 Closed
182 Open 2,581 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

ClinVar submission timeouts bug
#5299 opened Mar 7, 2025 by Jakob37
1
@northwestwitch
37
Displaying ClinVar ONC annotations Cancer enhancement
#5298 opened Mar 6, 2025 by mathiasbio
1
@northwestwitch
34
Show only buttons for available research variants enhancement QualityOfLife
#5272 opened Feb 28, 2025 by northwestwitch
Option to request upload of all variants for a gene/region from the web interface enhancement
#5265 opened Feb 25, 2025 by beatrizsavinhas
3
SV "compounds"/pairs enhancement
#5252 opened Feb 19, 2025 by dnil
Scout user meeting, 250312 9.00 Agenda
#5249 opened Feb 18, 2025 by dnil
2
Variant cleanup on stage Clinical Genomics Solna instance only Task
#5248 opened Feb 18, 2025 by northwestwitch
Display actual variant on RD SNV variantS page enhancement
#5246 opened Feb 14, 2025 by dnil
SV-track in IGV.js for LRS? LRS Under discussion
#5232 opened Feb 10, 2025 by fellen31
3
Clinvar submissions page crashes if clinvar_subm_id is null bug
#5229 opened Feb 7, 2025 by mhkc
Respect rank threshold for research upload enhancement
#5216 opened Feb 4, 2025 by dnil
@northwestwitch
Update the SpliceAI hover (and perhaps main display line) enhancement QualityOfLife
#5211 opened Jan 31, 2025 by dnil
Handle the whole ClinVar submission process in scout enhancement Intermediate Task
#5199 opened Jan 27, 2025 by northwestwitch
Create somatic ClinVar submissions Intermediate Task
#5198 opened Jan 27, 2025 by northwestwitch
Modify format of non-somatic ClinVar submissions so they look like json API submissions Intermediate Refactor Task
#5197 opened Jan 27, 2025 by northwestwitch
@northwestwitch
Desktop Scout integration (especially sashimi plots and other RNA customisation) enhancement RNA-seq
#5189 opened Jan 22, 2025 by dnil
2
Rework rank score file reading enhancement
#5186 opened Jan 21, 2025 by dnil
Scout down for updates indicator enhancement
#5182 opened Jan 17, 2025 by dnil
Extended admin UI control for users and user institute access enhancement
#5159 opened Jan 9, 2025 by Jakob37
2
Add data- and library attribution to a live view enhancement
#5134 opened Dec 18, 2024 by dnil
info from CLinvar blocked enhancement nf-core/raredisease
#5133 opened Dec 18, 2024 by 4WGH
2
ORPHA prevalences enhancement
#5130 opened Dec 18, 2024 by dnil
load variants command has a parameter spelled wrong Refactor Scout5.0
#5090 opened Nov 29, 2024 by northwestwitch
3
Refactor general case report variant decoration Refactor
#5078 opened Nov 26, 2024 by dnil
Classify function in Clinical structural variants view enhancement Under discussion
#5074 opened Nov 26, 2024 by SofieCMD
1
@northwestwitch
7
ProTip! Find all open issues with in progress development work with linked:pr.