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covid19-rmarkdown

RMarkdown fact sheets for COVID-19 Indicators

Project Organization

├── LICENSE
├── Makefile                 <- Makefile with commands like `make data` or `make train`
├── README.md                <- The top-level README for developers using this project.
├── Dockerfile               <- Docker image for this project.
|
├── catalogs                 <- A data catalog.
├── data                     <- A directory for local data.
|
├── notebooks                <- Jupyter notebooks.
│
├── conda-requirements.txt   <- The requirements file for conda installs.
├── requirements.txt         <- The requirements file for reproducing the analysis environment, e.g.
│                               generated with `pip freeze > requirements.txt`
│
├── setup.py                 <- Makes project pip installable (pip install -e .) so src can be imported
├── src                      <- Source code for use in this project.

Starting with JupyterLab

  1. Sign in with credentials. More details on getting started here.
  2. Launch a new terminal and clone repository: git clone https://github.com/CityOfLosAngeles/REPO-NAME.git
  3. Change into directory: cd REPO-NAME
  4. Make a new branch and start on a new task: git checkout -b new-branch

Starting with Docker

  1. Start with Steps 1-2 above
  2. Build Docker container: docker-compose.exe build
  3. Start Docker container docker-compose.exe up
  4. Open Jupyter Lab notebook by typing localhost:8888/lab/ in the browser for Python, localhost:8888/rstudio/ or localhost:8787/rstudio/ for RStudio.

Setting up a Conda Environment

  1. conda create --name my_project_name
  2. source activate my_project_name
  3. conda install --file conda-requirements.txt -c conda-forge
  4. pip install requirements.txt

Project based on the cookiecutter data science project template. #cookiecutterdatascience

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