Bio2Byte
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simsapiper
simsapiper PublicA Nextflow pipeline that creates reliable, structure-informed MSAs of thousands of protein sequences which can supplement structural information from online resources automatically
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public_notebooks
public_notebooks PublicRepository of Jupyter Notebooks created by the Bio2Byte group
Jupyter Notebook 9
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Scop3P-notebooks
Scop3P-notebooks PublicJupyter notebook examples of SCOP3P REST API services
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bio2byte-peptidebuilder
bio2byte-peptidebuilder PublicForked from clauswilke/PeptideBuilder
A simple Python library to generate model peptides (incl. capping groups and modified residues)
Python 1
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bio2byte-mdutils
bio2byte-mdutils PublicTemplates and analysis scripts for MD simulations of post-translationally modified peptides
Jupyter Notebook 1
Repositories
- simsapiper Public
A Nextflow pipeline that creates reliable, structure-informed MSAs of thousands of protein sequences which can supplement structural information from online resources automatically
Bio2Byte/simsapiper’s past year of commit activity - GPCRchimeraDB Public
Repository of the database GPCRchimeraDB: description at the sequence, structural and biophyiscal level of chimeric and natural GPCRs
Bio2Byte/GPCRchimeraDB’s past year of commit activity - parrot-mps Public Forked from idptools/parrot
Python package for protein sequence-based bidirectional recurrent neural network. Generalizable to a variety of protein bioinformatic applications.
Bio2Byte/parrot-mps’s past year of commit activity - nf-b2btools-shiftcrypt Public
Nextflow pipeline to predict Shiftcrypt values from NEF or NMR-STAR data files
Bio2Byte/nf-b2btools-shiftcrypt’s past year of commit activity - ortholint Public
A nextflow pipeline that creates (or takes) orthologous groups from gene-called genomes and runs sequence- and structure based QC to remove outliers
Bio2Byte/ortholint’s past year of commit activity - constava Public
Constava analyzes conformational ensembles calculating conformational state propensities and conformational state variability.
Bio2Byte/constava’s past year of commit activity - metapredict-mps Public Forked from idptools/metapredict
A machine learning based protein disorder predictor supporting mps
Bio2Byte/metapredict-mps’s past year of commit activity
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