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  • Medical University of South Carolina

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Achievement: QuickdrawAchievement: Pull Shark

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BenCaiello/README.md

  • Hi, I’m @BenCaiello

  • I have a background in Biological / Medical Research Sciences, with experience in "wet labs" doing cell-culture and other molecular biology experiments.

  • Employed as a Laboratory Technologist to operate mass cytometry and imaging mass cytometry equipment at the Medical Univeristy of South Carolina

  • I’m currently learning code and packages (predominantly R, Python, & some GUI based tools) for the analysis of Mass Cytometry and Imaging Mass Cytometry data

    • Goal: be able to help core users with the analysis of their IMC data and develop a standardized pipeline for analysis offered by the core

  • How to reach me: here

Popular repositories Loading

  1. IMC_Denoise_integrated_to_steinbock IMC_Denoise_integrated_to_steinbock Public

    Forked from PENGLU-WashU/IMC_Denoise

    IMC_Denoise: a software package to enhance Imaging Mass Cytometry - Nature Communications

    Jupyter Notebook 2

  2. BenCaiello BenCaiello Public

    Config files for my GitHub profile.

  3. REDSEA_python_steinbock_Mesmer_masks REDSEA_python_steinbock_Mesmer_masks Public

    Forked from nolanlab/REDSEA

    Python script for REDSEA with new Steinbock / DeepCell masks

    Jupyter Notebook

  4. mibilib_fork mibilib_fork Public

    Forked from ionpath/mibilib

    Python client for IONpath MIBItracker API, plus utility functions for working with MIBItiff images.

    Jupyter Notebook

  5. PalmettoBUG PalmettoBUG Public

    Package / GUI for Imaging Mass Cytometry Data Analysis

    Jupyter Notebook

  6. isoSegDenoise isoSegDenoise Public

    Semi-independent helper Program for PalmettoBUG IMC data analysis software

    Python