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fix: structure of the pages according to feedback #61

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merged 8 commits into from
Feb 21, 2025
Merged

fix: structure of the pages according to feedback #61

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298445d
fix: structure according to feedback
RadovanTomik Feb 20, 2025
82bbf7c
chore: update ci
RadovanTomik Feb 21, 2025
750e609
fix: quality management tables
RadovanTomik Feb 21, 2025
ca857b9
Update Data-describing-DigitalPathology-Assay.md
CeciliaEngels Feb 21, 2025
ec0f97b
Update Data-describing-DigitalPathology-Scan.md
CeciliaEngels Feb 21, 2025
bb78f79
Update Data-describing_DigitalPathology-File.md
CeciliaEngels Feb 21, 2025
ee99d57
fix: ui sidebar structure
RadovanTomik Feb 21, 2025
14052ca
fix: ui sidebar structure
RadovanTomik Feb 21, 2025
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4 changes: 3 additions & 1 deletion .github/workflows/CI.yml
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@@ -1,7 +1,9 @@
name: CI build

on:
pull_request:
push:
branches:
- master
permissions: read-all
jobs:

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23 changes: 13 additions & 10 deletions .vitepress/config.mts
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Expand Up @@ -36,16 +36,15 @@ export default defineConfig({
},
sidebar: [
{text: 'About', link: '/readme'},
{text: 'Core', collapsed: false,items: [
{text: 'About', link: '/Core/README'},
{text: 'V3', collapsed: false, items: [
{text: 'Core', collapsed: false, link: '/Core/README', items: [
{text: 'V3.0', collapsed: false, items: [
{text: 'Network', link: '/Core/V3/Data-describing-Network'},
{text: 'Biobank', link: '/Core/V3/Data-describing-Biobank'},
{text: 'Collection', link: '/Core/V3/Data-describing-Collection'},
{text: 'Research Resource', link: '/Core/V3/Data-describing-ResearchResource'}
]},
{
text: 'V2',collapsed: true, items: [
text: 'V2.0',collapsed: true, items: [
{text: 'Study', link: '/Core/V2/Data-describing-Study'},
{text: 'Biobank', link: '/Core/V2/Data-describing-Biobank'},
{text: 'Collection', link: '/Core/V2/Data-describing-SampleCollection'},
Expand All @@ -54,10 +53,9 @@ export default defineConfig({
}
]},
{
text: 'Components',
text: 'Sample Donor + Sample + Event',
collapsed: false,
items: [
{text: 'Individual', items: [
{text: 'V1.1', link: '/Individual/V1.1/readme_v1.1', collapsed: false, items: [
{text: 'Donor', link: '/Individual/V1.1/Data-describing-Sample-Donor'},
{text: 'Sample', link: '/Individual/V1.1/Data-describing-Sample'},
Expand All @@ -71,11 +69,16 @@ export default defineConfig({
{
text: 'Event', link: '/Individual/V1.0/Data-describing-Event',
}
]}
]},
{text: 'Digital Pathology', link: 'DigitalPathology/README'},
]},
]
}
},
{text: 'Digital Pathology', link: 'DigitalPathology/README', items: [
{text: 'V0.1', items: [
{text: 'Assay', link: '/drafts/Data-describing-DigitalPathology-Assay.md'},
{text: 'Scan', link: '/drafts/Data-describing-DigitalPathology-Scan.md'},
{text: 'File', link: '/drafts/Data-describing_DigitalPathology-File.md'},
]}
]},
],
footer: {
copyright: 'Copyright© 2016-present MIABIS community'
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0 Individual/V1/Data-describing-Event.md → Individual/V1.0/Data-describing-Event.md
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0 ...vidual/V1/Data-describing-Sample-Donor.md → ...dual/V1.0/Data-describing-Sample-Donor.md
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0 Individual/V1/Data-describing-Sample.md → Individual/V1.0/Data-describing-Sample.md
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3 changes: 3 additions & 0 deletions drafts/Data-describing-BiobankServices.md
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@@ -1,3 +1,6 @@
> [!WARNING]
> This is a draft, contents may change.

The scope of the "Biobank and Biomolecular Research Services" component aims to improve the MIABIS to help researchers find the right biobank or further biomolecular research services services by adding a new data structure.

| Attribute Code | Attribute Name | Description | Data type | Allowed values| Constraints | Cardinality |
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3 changes: 2 additions & 1 deletion drafts/Data-describing-DigitalPathology-Assay.md
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@@ -1,4 +1,5 @@
+++ currently under review with the BBMRI-ERIC Management Committee (MC) +++
> [!WARNING]
> This is a draft under the review by the BBMRI-ERIC Management Committee.

## Definition

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3 changes: 2 additions & 1 deletion drafts/Data-describing-DigitalPathology-Scan.md
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@@ -1,4 +1,5 @@
+++ currently under review with the BBMRI-ERIC Management Committee (MC) +++
> [!WARNING]
> This is a draft under the review by the BBMRI-ERIC Management Committee.

## Definition

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3 changes: 2 additions & 1 deletion drafts/Data-describing_DigitalPathology-File.md
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@@ -1,4 +1,5 @@
+++ currently under review with the BBMRI-ERIC Management Committee (MC) +++
> [!WARNING]
> This is a draft under the review by the BBMRI-ERIC Management Committee.

## Definition

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