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Comment out rendering estimate tumor purity (see issue #92)
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envest committed Feb 13, 2025
1 parent 498a718 commit 28576f8
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion 03-bulk_experiments.R
Original file line number Diff line number Diff line change
Expand Up @@ -11,7 +11,7 @@ estimate_tumor_purity_filepath <- file.path(nb_dir, "ESTIMATE_tumor_purity.Rmd")
baseline_models_filepath <- file.path(nb_dir, "baseline_models.Rmd")

# ESTIMATE tumor purity
rmarkdown::render(estimate_tumor_purity_filepath)
#rmarkdown::render(estimate_tumor_purity_filepath)

# Run baseline models
rmarkdown::render(baseline_models_filepath, params = list(create_models = TRUE))
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