improve the Rmarkdown for example

zxy0912 · zxy0912 · commit b1dbd17115ab · 2025-01-26T21:48:22.000-05:00
diff --git a/vignettes/simu-example.Rmd b/vignettes/simu-example.Rmd
@@ -60,3 +60,4 @@ print(result$GK.filter$tau[1:k])
 print(result$GK.filter$q[1:k])
 ```
 
+We obtain the knockoff statistics defined in the GhostKnockoff manuscript, as well as the q-values for all genetic elements. We focus on the first $k$ elements, corresponding to the result of $k$ genes. The first gene (the true causal gene) has a large $tau$ value and a small q-value.

Original file line number	Diff line number	Diff line change
`@@ -60,3 +60,4 @@ print(result$GK.filter$tau[1:k])`
`60`	`60`	`print(result$GK.filter$q[1:k])`
`61`	`61`	```
`62`	`62`
	`63`	`+We obtain the knockoff statistics defined in the GhostKnockoff manuscript, as well as the q-values for all genetic elements. We focus on the first $k$ elements, corresponding to the result of $k$ genes. The first gene (the true causal gene) has a large $tau$ value and a small q-value.`