Add topologySpreadConstraints configuration to pod spec.

Author: laiminhtrung1997

e2e/tests/test_e2e.py

@@ -560,7 +560,7 @@ def compare_config():
 
             pg_patch_config["spec"]["patroni"]["slots"][slot_to_change]["database"] = "bar"
             del pg_patch_config["spec"]["patroni"]["slots"][slot_to_remove]
-            
+
             k8s.api.custom_objects_api.patch_namespaced_custom_object(
                 "acid.zalan.do", "v1", "default", "postgresqls", "acid-minimal-cluster", pg_delete_slot_patch)
 
@@ -577,7 +577,7 @@ def compare_config():
 
             self.eventuallyEqual(lambda: self.query_database(leader.metadata.name, "postgres", get_slot_query%("database", slot_to_change))[0], "bar",
                 "The replication slot cannot be updated", 10, 5)
-            
+
             # make sure slot from Patroni didn't get deleted
             self.eventuallyEqual(lambda: len(self.query_database(leader.metadata.name, "postgres", get_slot_query%("slot_name", patroni_slot))), 1,
                 "The replication slot from Patroni gets deleted", 10, 5)
@@ -933,7 +933,7 @@ def test_ignored_annotations(self):
                     },
                 }
             }
-            
+
             old_sts_creation_timestamp = sts.metadata.creation_timestamp
             k8s.api.apps_v1.patch_namespaced_stateful_set(sts.metadata.name, sts.metadata.namespace, annotation_patch)
             old_svc_creation_timestamp = svc.metadata.creation_timestamp
@@ -1370,7 +1370,7 @@ def test_persistent_volume_claim_retention_policy(self):
         }
         k8s.update_config(patch_scaled_policy_retain)
         self.eventuallyEqual(lambda: k8s.get_operator_state(), {"0": "idle"}, "Operator does not get in sync")
- 
+
         # decrease the number of instances
         k8s.api.custom_objects_api.patch_namespaced_custom_object(
             'acid.zalan.do', 'v1', 'default', 'postgresqls', 'acid-minimal-cluster', pg_patch_scale_down_instances)
@@ -1647,7 +1647,6 @@ def test_node_readiness_label(self):
         # toggle pod anti affinity to move replica away from master node
         self.assert_distributed_pods(master_nodes)
 
-
     @timeout_decorator.timeout(TEST_TIMEOUT_SEC)
     def test_overwrite_pooler_deployment(self):
         pooler_name = 'acid-minimal-cluster-pooler'
@@ -1796,7 +1795,7 @@ def test_password_rotation(self):
             },
         }
         k8s.api.core_v1.patch_namespaced_secret(
-            name="foo-user.acid-minimal-cluster.credentials.postgresql.acid.zalan.do", 
+            name="foo-user.acid-minimal-cluster.credentials.postgresql.acid.zalan.do",
             namespace="default",
             body=secret_fake_rotation)
 
@@ -1812,7 +1811,7 @@ def test_password_rotation(self):
             "data": {
                 "enable_password_rotation": "true",
                 "password_rotation_interval": "30",
-                "password_rotation_user_retention": "30",  # should be set to 60 
+                "password_rotation_user_retention": "30",  # should be set to 60
             },
         }
         k8s.update_config(enable_password_rotation)
@@ -1865,7 +1864,7 @@ def test_password_rotation(self):
                         "Unexpected username in secret of test.db_user: expected {}, got {}".format("test.db_user", secret_username))
 
         # disable password rotation for all other users (foo_user)
-        # and pick smaller intervals to see if the third fake rotation user is dropped 
+        # and pick smaller intervals to see if the third fake rotation user is dropped
         enable_password_rotation = {
             "data": {
                 "enable_password_rotation": "false",
@@ -2363,6 +2362,56 @@ def test_taint_based_eviction(self):
         # toggle pod anti affinity to move replica away from master node
         self.assert_distributed_pods(master_nodes)
 
+    @timeout_decorator.timeout(TEST_TIMEOUT_SEC)
+    def test_topology_spread_constraints(self):
+        '''
+            Enable topologySpreadConstraints for pods
+        '''
+        k8s = self.k8s
+        cluster_labels = "application=spilo,cluster-name=acid-minimal-cluster"
+
+        # Verify we are in good state from potential previous tests
+        self.eventuallyEqual(lambda: k8s.count_running_pods(), 2, "No 2 pods running")
+
+        master_nodes, replica_nodes = k8s.get_cluster_nodes()
+        self.assertNotEqual(master_nodes, [])
+        self.assertNotEqual(replica_nodes, [])
+
+        # Patch label to nodes for topologySpreadConstraints
+        patch_node_label = {
+            "metadata": {
+                "labels": {
+                    "topology.kubernetes.io/zone": "zalando"
+                }
+            }
+        }
+        k8s.api.core_v1.patch_node(master_nodes[0], patch_node_label)
+        k8s.api.core_v1.patch_node(replica_nodes[0], patch_node_label)
+
+        # Scale-out postgresql pods
+        k8s.api.custom_objects_api.patch_namespaced_custom_object("acid.zalan.do", "v1", "default", "postgresqls", "acid-minimal-cluster",
+            {"spec": {"numberOfInstances": 6}})
+        self.eventuallyEqual(lambda: k8s.get_operator_state(), {"0": "idle"}, "Operator does not get in sync")
+        self.eventuallyEqual(lambda: k8s.count_pods_with_label(cluster_labels), 6, "Postgresql StatefulSet are scale to 6")
+        self.eventuallyEqual(lambda: k8s.count_running_pods(), 6, "All pods are running")
+
+        worker_node_1 = 0
+        worker_node_2 = 0
+        pods = k8s.api.core_v1.list_namespaced_pod('default', label_selector=cluster_labels)
+        for pod in pods.items:
+            if pod.spec.node_name == 'postgres-operator-e2e-tests-worker':
+                worker_node_1 += 1
+            elif pod.spec.node_name == 'postgres-operator-e2e-tests-worker2':
+                worker_node_2 += 1
+
+        self.assertEqual(worker_node_1, worker_node_2)
+        self.assertEqual(worker_node_1, 3)
+        self.assertEqual(worker_node_2, 3)
+
+        # Scale-it postgresql pods to previous replicas
+        k8s.api.custom_objects_api.patch_namespaced_custom_object("acid.zalan.do", "v1", "default", "postgresqls", "acid-minimal-cluster",
+            {"spec": {"numberOfInstances": 2}})
+
     @timeout_decorator.timeout(TEST_TIMEOUT_SEC)
     def test_zz_cluster_deletion(self):
         '''
@@ -2438,7 +2487,7 @@ def test_zz_cluster_deletion(self):
             self.eventuallyEqual(lambda: k8s.count_deployments_with_label(cluster_label), 0, "Deployments not deleted")
             self.eventuallyEqual(lambda: k8s.count_pdbs_with_label(cluster_label), 0, "Pod disruption budget not deleted")
             self.eventuallyEqual(lambda: k8s.count_secrets_with_label(cluster_label), 8, "Secrets were deleted although disabled in config")
-            self.eventuallyEqual(lambda: k8s.count_pvcs_with_label(cluster_label), 3, "PVCs were deleted although disabled in config")
+            self.eventuallyEqual(lambda: k8s.count_pvcs_with_label(cluster_label), 6, "PVCs were deleted although disabled in config")
 
         except timeout_decorator.TimeoutError:
             print('Operator log: {}'.format(k8s.get_operator_log()))
@@ -2480,7 +2529,7 @@ def assert_distributed_pods(self, target_nodes, cluster_labels='cluster-name=aci
 
         # if nodes are different we can quit here
         if master_nodes[0] not in replica_nodes:
-            return True             
+            return True
 
         # enable pod anti affintiy in config map which should trigger movement of replica
         patch_enable_antiaffinity = {
@@ -2504,7 +2553,7 @@ def assert_distributed_pods(self, target_nodes, cluster_labels='cluster-name=aci
             }
             k8s.update_config(patch_disable_antiaffinity, "disable antiaffinity")
             self.eventuallyEqual(lambda: k8s.get_operator_state(), {"0": "idle"}, "Operator does not get in sync")
-            
+
             k8s.wait_for_pod_start('spilo-role=replica,' + cluster_labels)
             k8s.wait_for_running_pods(cluster_labels, 2)
 
@@ -2515,7 +2564,7 @@ def assert_distributed_pods(self, target_nodes, cluster_labels='cluster-name=aci
             # if nodes are different we can quit here
             for target_node in target_nodes:
                 if (target_node not in master_nodes or target_node not in replica_nodes) and master_nodes[0] in replica_nodes:
-                    print('Pods run on the same node') 
+                    print('Pods run on the same node')
                     return False
 
         except timeout_decorator.TimeoutError:

manifests/postgresql.crd.yaml

@@ -574,6 +574,12 @@ spec:
                         - PreferNoSchedule
                     tolerationSeconds:
                       type: integer
+              topologySpreadConstraints:
+                type: array
+                nullable: true
+                items:
+                  type: object
+                  x-kubernetes-preserve-unknown-fields: true
               useLoadBalancer:
                 type: boolean
                 description: deprecated

pkg/apis/acid.zalan.do/v1/crds.go

@@ -895,6 +895,16 @@ var PostgresCRDResourceValidation = apiextv1.CustomResourceValidation{
 							},
 						},
 					},
+					"topologySpreadConstraints": {
+						Type:     "array",
+						Nullable: true,
+						Items: &apiextv1.JSONSchemaPropsOrArray{
+							Schema: &apiextv1.JSONSchemaProps{
+								Type:                   "object",
+								XPreserveUnknownFields: util.True(),
+							},
+						},
+					},
 					"useLoadBalancer": {
 						Type:        "boolean",
 						Description: "deprecated",

pkg/apis/acid.zalan.do/v1/operator_configuration_type.go

@@ -108,6 +108,7 @@ type KubernetesMetaConfiguration struct {
 	EnableReadinessProbe                     bool                `json:"enable_readiness_probe,omitempty"`
 	EnableCrossNamespaceSecret               bool                `json:"enable_cross_namespace_secret,omitempty"`
 	EnableFinalizers                         *bool               `json:"enable_finalizers,omitempty"`
+	EnablePostgresTopologySpreadConstraints  bool                `json:"enable_postgres_topology_spread_constraints,omitempty"`
 }
 
 // PostgresPodResourcesDefaults defines the spec of default resources

pkg/apis/acid.zalan.do/v1/postgresql_type.go

@@ -93,6 +93,8 @@ type PostgresSpec struct {
 	// deprecated json tags
 	InitContainersOld       []v1.Container `json:"init_containers,omitempty"`
 	PodPriorityClassNameOld string         `json:"pod_priority_class_name,omitempty"`
+
+	TopologySpreadConstraints []v1.TopologySpreadConstraint `json:"topologySpreadConstraints,omitempty"`
 }
 
 // +k8s:deepcopy-gen:interfaces=k8s.io/apimachinery/pkg/runtime.Object

pkg/cluster/cluster.go

@@ -494,6 +494,11 @@ func (c *Cluster) compareStatefulSetWith(statefulSet *appsv1.StatefulSet) *compa
 		needsRollUpdate = true
 		reasons = append(reasons, "new statefulset's pod affinity does not match the current one")
 	}
+	if !reflect.DeepEqual(c.Statefulset.Spec.Template.Spec.TopologySpreadConstraints, statefulSet.Spec.Template.Spec.TopologySpreadConstraints) {
+		needsReplace = true
+		needsRollUpdate = true
+		reasons = append(reasons, "new statefulset's pod topologySpreadConstraints does not match the current one")
+	}
 	if len(c.Statefulset.Spec.Template.Spec.Tolerations) != len(statefulSet.Spec.Template.Spec.Tolerations) {
 		needsReplace = true
 		needsRollUpdate = true

pkg/cluster/k8sres.go

@@ -599,6 +599,22 @@ func generatePodAntiAffinity(podAffinityTerm v1.PodAffinityTerm, preferredDuring
 	return podAntiAffinity
 }
 
+func generateTopologySpreadConstraints(labels labels.Set, topologySpreadConstraints []v1.TopologySpreadConstraint) []v1.TopologySpreadConstraint {
+	topologySpreadConstraint := v1.TopologySpreadConstraint{
+		MaxSkew:           int32(1),
+		TopologyKey:       "topology.kubernetes.io/zone",
+		WhenUnsatisfiable: v1.DoNotSchedule,
+		LabelSelector: &metav1.LabelSelector{
+			MatchLabels: labels,
+		},
+	}
+	topologySpreadConstraints := []v1.TopologySpreadConstraint{topologySpreadConstraint}
+	if len(topologySpreadConstraints) > 0 {
+		topologySpreadConstraints = append(topologySpreadConstraints, topologySpreadConstraints...)
+	}
+	return topologySpreadConstraints
+}
+
 func tolerations(tolerationsSpec *[]v1.Toleration, podToleration map[string]string) []v1.Toleration {
 	// allow to override tolerations by postgresql manifest
 	if len(*tolerationsSpec) > 0 {
@@ -821,6 +837,7 @@ func (c *Cluster) generatePodTemplate(
 	additionalSecretMount string,
 	additionalSecretMountPath string,
 	additionalVolumes []acidv1.AdditionalVolume,
+	topologySpreadConstraints []v1.TopologySpreadConstraint,
 ) (*v1.PodTemplateSpec, error) {
 
 	terminateGracePeriodSeconds := terminateGracePeriod
@@ -873,6 +890,10 @@ func (c *Cluster) generatePodTemplate(
 		podSpec.PriorityClassName = priorityClassName
 	}
 
+	if topologySpreadConstraints {
+		podSpec.TopologySpreadConstraints = generateTopologySpreadConstraints(labels, topologySpreadConstraints)
+	}
+
 	if sharePgSocketWithSidecars != nil && *sharePgSocketWithSidecars {
 		addVarRunVolume(&podSpec)
 	}
@@ -1476,7 +1497,8 @@ func (c *Cluster) generateStatefulSet(spec *acidv1.PostgresSpec) (*appsv1.Statef
 		c.OpConfig.PodAntiAffinityPreferredDuringScheduling,
 		c.OpConfig.AdditionalSecretMount,
 		c.OpConfig.AdditionalSecretMountPath,
-		additionalVolumes)
+		additionalVolumes,
+		spec.TopologySpreadConstraints)
 
 	if err != nil {
 		return nil, fmt.Errorf("could not generate pod template: %v", err)
@@ -2334,7 +2356,9 @@ func (c *Cluster) generateLogicalBackupJob() (*batchv1.CronJob, error) {
 		false,
 		c.OpConfig.AdditionalSecretMount,
 		c.OpConfig.AdditionalSecretMountPath,
-		[]acidv1.AdditionalVolume{}); err != nil {
+		[]acidv1.AdditionalVolume{},
+		true,
+		[]v1.TopologySpreadConstraint{}); err != nil {
 		return nil, fmt.Errorf("could not generate pod template for logical backup pod: %v", err)
 	}
 

pkg/cluster/k8sres_test.go

@@ -3886,3 +3886,46 @@ func TestGenerateCapabilities(t *testing.T) {
 		}
 	}
 }
+
+func TestTopologySpreadConstraints(t *testing.T) {
+	clusterName := "acid-test-cluster"
+	namespace := "default"
+
+	pg := acidv1.Postgresql{
+		ObjectMeta: metav1.ObjectMeta{
+			Name:      clusterName,
+			Namespace: namespace,
+		},
+		Spec: acidv1.PostgresSpec{
+			NumberOfInstances: 1,
+			Resources: &acidv1.Resources{
+				ResourceRequests: acidv1.ResourceDescription{CPU: k8sutil.StringToPointer("1"), Memory: k8sutil.StringToPointer("10")},
+				ResourceLimits:   acidv1.ResourceDescription{CPU: k8sutil.StringToPointer("1"), Memory: k8sutil.StringToPointer("10")},
+			},
+			Volume: acidv1.Volume{
+				Size: "1G",
+			},
+		},
+	}
+
+	cluster := New(
+		Config{
+			OpConfig: config.Config{
+				PodManagementPolicy: "ordered_ready",
+			},
+		}, k8sutil.KubernetesClient{}, acidv1.Postgresql{}, logger, eventRecorder)
+	cluster.Name = clusterName
+	cluster.Namespace = namespace
+	cluster.labelsSet(true)
+
+	s, err := cluster.generateStatefulSet(&pg.Spec)
+	assert.NoError(t, err)
+	assert.Contains(t, s.Spec.Template.Spec.TopologySpreadConstraints, v1.TopologySpreadConstraint{
+		MaxSkew:           int32(1),
+		TopologyKey:       "topology.kubernetes.io/zone",
+		WhenUnsatisfiable: v1.DoNotSchedule,
+		LabelSelector: &metav1.LabelSelector{
+			MatchLabels: cluster.labelsSet(true),
+		},
+	})
+}

pkg/util/config/config.go

@@ -254,6 +254,7 @@ type Config struct {
 	EnableSecretsDeletion                    *bool             `name:"enable_secrets_deletion" default:"true"`
 	EnablePersistentVolumeClaimDeletion      *bool             `name:"enable_persistent_volume_claim_deletion" default:"true"`
 	PersistentVolumeClaimRetentionPolicy     map[string]string `name:"persistent_volume_claim_retention_policy" default:"when_deleted:retain,when_scaled:retain"`
+	EnablePostgresTopologySpreadConstraints  bool              `json:"enable_postgres_topology_spread_constraints,omitempty"`
 }
 
 // MustMarshal marshals the config or panics