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_includes/.#header.html

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_site/index.html

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<meta charset='utf-8'>
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<meta http-equiv="X-UA-Compatible" content="chrome=1">
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<meta name="viewport" content="width=device-width,maximum-scale=2">
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<meta name="description" content="Welcome to the Cabbage Looper Database : Cababge looper genome and annotations">
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<meta name="description" content="Welcome to the Cabbage Looper Database : Cababge looper genome and annotation">
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<link rel="stylesheet" type="text/css" media="screen" href="/assets/css/style.css?v=4015e06129f703da35a335a2b3c2dc521ea37309">
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<title>Welcome to the Cabbage Looper Database</title>
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<a id="forkme_banner" href="http://github.com/weng-lab/cabbagelooper">View on GitHub</a>
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<h1 id="project_title">Welcome to the Cabbage Looper Database</h1>
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<h2 id="project_tagline">Cababge looper genome and annotations</h2>
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<h2 id="project_tagline">Cababge looper genome and annotation</h2>
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<h1 id="about-cabbage-looper-database">About Cabbage Looper Database</h1>
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<h1 id="about-the-cabbage-looper-database">About the Cabbage Looper Database</h1>
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<p>This database provides access to the cabbage looper (<em>Trichoplusia ni</em>) genome assembly and annotation. <a href="https://github.com/weng-lab/cabbagelooper"><img src="https://img.shields.io/github/downloads/weng-lab/cabbagelooper/total.svg?style=flat-square" alt="Github All Releases" /></a></p>
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<h2 id="genome-assemblies">Genome assemblies</h2>
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<p>The latest cabbage looper genome assembly (tn1) contains 1,031 scaffolds spanning 368.2 Mb. The scaffold N50 is 14.2 Mb, with &gt;90% of the bases in 28 chromosome-length scaffolds. Contig N50 is 621.9 kb.</p>

index.md

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{% include header.html %}
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# About Cabbage Looper Database
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# About the Cabbage Looper Database
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This database provides access to the cabbage looper (*Trichoplusia ni*) genome assembly and annotation. [![Github All Releases](https://img.shields.io/github/downloads/weng-lab/cabbagelooper/total.svg?style=flat-square)](https://github.com/weng-lab/cabbagelooper)
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## Genome assemblies
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The latest cabbage looper genome assembly (tn1) contains 1,031 scaffolds spanning 368.2 Mb. The scaffold N50 is 14.2 Mb, with >90% of the bases in 28 chromosome-length scaffolds. Contig N50 is 621.9 kb.

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