proteomics
Here are 598 public repositories matching this topic...
Re-analysis of data from childhood acute lymphoblastic leukemia study in Nat. Comm. April 2019
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Apr 11, 2019 - HTML
R package which wraps useful c++ functions for dealing with string representations of peptides
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Sep 29, 2023 - C++
Contextualization of protein-protein interaction databases by cell line
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Mar 3, 2021 - Python
QC dashboard for LC-MS proteomic equipment using R and shinydashboard
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Mar 19, 2022 - R
A simplistic user interface for the MSstats Sample Size Project
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Jul 15, 2020 - R
pytrapment - making entrapment databases great again!
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May 1, 2021 - Python
R pipeline for generating and classifying plasmodesmata (PD) candidates based on proteomics and feature prediction.
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Dec 20, 2022
R package which contains a number of utilities for mass spectrometry
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Oct 2, 2023 - R
Impose constraints on enzyme abundances ratios in enzyme-constraint metabolic models
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Sep 18, 2023 - MATLAB
These are a couple of simple python scripts to help you navigate through PRIDE (The Proteomics Identifications Database).
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Nov 18, 2022 - Python
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Mar 14, 2023 - R
Slides and files for a talk I gave at NUS on 2012-08-30
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Sep 1, 2012
Collisional cross-section prediction for modified peptides
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Jun 27, 2024 - Python
Quantification and statistical analysis of quantitative proteomics experiments.
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May 24, 2017 - C#
MGSAT semi-automated differential abundance analysis of omics datasets
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Feb 14, 2020 - R
Map the peptides to its corresponding protein sequence and locate the modification sites
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Nov 28, 2018 - Python
Python program which is able to analyse dssp files in order to estimate the interacting area and interacting residues between monomers of a complex protein
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Dec 13, 2019 - Python
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