Aggregate results from bioinformatics analyses across many samples into a single report.
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Updated
Jun 3, 2024 - JavaScript
Aggregate results from bioinformatics analyses across many samples into a single report.
Test data for MultiQC.
A miniature example of a MultiQC plugin.
MultiQC plugin interacting with the Illumina Genologics Clarity LIMS
A simple fastp-MultiQC nextflow pipeline
TaxTriage is a Nextflow workflow designed to agnostically identify and classify microbial organisms within short- or long-read metagenomic NGS data. This flexible tool was developed with various use-cases of mNGS in mind.
Estimate fastq-formatted read abundace in RNA-Seq analysis with Kallisto
AlphaFold-based Protein Analysis Pipeline
CCBR pipeline for preliminary QC and peak calling from ATACseq datasets
Generation Quality Controls Files for MSK-ACCESS
Run multiple metagenome filtering programs using Docker containers
Map and post-process your bams for SNP calling
RNA-seq, smRNA-seq, scRNA-seq & ATAC-seq workflows for @cornell-TREX
Count your fastq-formatted rna-seq reads with Salmon
Quality Control, Mapping and Reads Count for RNA-Seq Analysis
Exploring Bioinformatics pipelines
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