markov-state-model
Here are 13 public repositories matching this topic...
Scripts used for MSM and post-dynamics analysis of PMV simulations
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Mar 1, 2022 - Jupyter Notebook
Data, methods and code for research on the molecular dynamics of HIV glycoprotein gp120
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Mar 21, 2020
Predicting kinetics of aromatic side-chain flipping using Markov State Model
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Jun 16, 2022 - Jupyter Notebook
Hands-on tutorials for Markov state modeling of MD and EXP data
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Mar 9, 2021 - Jupyter Notebook
Cryptic pocket prediction using AlphaFold 2
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Nov 27, 2022 - Jupyter Notebook
[Deprecated] py2.7 API.Cultor: Another BigData approach to sound collections
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Jan 13, 2022 - Python
Python package for generating Markov state models
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Jul 27, 2022 - Python
Modeling molecular ensembles with scalable data structures and parallel computing
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May 29, 2024 - Python
Tools for estimating and analyzing Markov state models
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Aug 15, 2022 - Python
Python library for analysis of time series data including dimensionality reduction, clustering, and Markov model estimation
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May 14, 2024 - Python
🚂 Python API for Emma's Markov Model Algorithms 🚂
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Sep 11, 2023 - Python
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