Pipeline for low-level RNA-Seq data processing
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Updated
Oct 4, 2016 - R
Pipeline for low-level RNA-Seq data processing
ChIP-seq pipeline (Nextflow)
(Archived) This page is a record of my first formal NGS Project for Dr. Matesic of University of South Carolina (USC).
A scripts used to check the NGS (Next-generation sequencing) raw data quality of fastq formated files, similar to FastQC.
Speedy FASTA/FASTQ library and toolkit
Sample an approximate number of reads from a fastq file without reading the entire file
ALAPY COMPRESSOR: FASTQ lossless compressor
A Scala library for working with FASTA/FASTQ data
Illumina (and SOLiD) sensitive read mapping tool (cloned from svn://scm.gforge.inria.fr/svnroot/storm/)
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