Side project to find jointly accessible regions in pairs of celltypes
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Updated
Jan 25, 2018 - Shell
Side project to find jointly accessible regions in pairs of celltypes
ATAC-Seq Transcription Factor Footprint Discovery and Analysis
Transcriptional and epigenetic signature of muscle tissue cells linked to atrophy
Batch annotation and visualization of the peaks identified from ChIP-seq, ChIP-chip, ATAC-seq experiments or any experiments resulted in large number of chromosome ranges
reports generated by ataqv for Gaulton lab ATAC data
The documented analysis of the results reported in Akol et al., 2023 as R markdowns, Galaxy histories and jupyter logs..
Nazzari, et al. (2023) 'Investigation of the effects of phthalates on in vitro thyroid models with RNA-Seq and ATAC-Seq'
An R-package for daily tasks required to handle biological data as well as avoid re-coding of small functions for quick but necessary data management.
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