From 52fda1fd42fb8a5b175c73e2a48b09b30d4fc6ad Mon Sep 17 00:00:00 2001
From: Sylvain SCHMITT <sylvain.schmitt@agroparistech.fr>
Date: Wed, 10 May 2017 09:17:07 -0300
Subject: [PATCH] SSDM 0.2.3 CRAN release

---
 DESCRIPTION         | 4 ++--
 NEWS.Rmd            | 3 +++
 NEWS.md             | 5 +++++
 cran-comment.md     | 6 +++++-
 inst/shiny/gui/ui.R | 2 +-
 5 files changed, 16 insertions(+), 4 deletions(-)

diff --git a/DESCRIPTION b/DESCRIPTION
index 777c48e..7eddd26 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,8 +1,8 @@
 Package: SSDM
 Type: Package
 Title: Stacked Species Distribution Modelling
-Version: 0.2.2.9002
-Author: Sylvain Schmitt, Robin Pouteau, Dimitri Justeau, Philippe Birnbaum
+Version: 0.2.3
+Author: Sylvain Schmitt, Robin Pouteau, Dimitri Justeau, Florian de Boissieu, Philippe Birnbaum
 Maintainer: Sylvain Schmitt <sylvain.schmitt@agroparistech.fr>
 URL: https://github.com/sylvainschmitt/SSDM
 BugReports: https://github.com/sylvainschmitt/SSDM/issues
diff --git a/NEWS.Rmd b/NEWS.Rmd
index 8f04951..cf5c607 100644
--- a/NEWS.Rmd
+++ b/NEWS.Rmd
@@ -11,6 +11,9 @@ output: github_document
 - add finer tests
 - document all S4 class and methods
 
+# SSDM 0.2.3
+- CRAN submission following article submission in MEE
+
 # SSDM 0.2.2.9002
 - Occurrences.csv and TRAVIS gdal
 - Vignettes 2, misspelling, and TRAVIS
diff --git a/NEWS.md b/NEWS.md
index 062918e..2098cda 100644
--- a/NEWS.md
+++ b/NEWS.md
@@ -12,6 +12,11 @@ TO DO
 -   add finer tests
 -   document all S4 class and methods
 
+SSDM 0.2.3
+==========
+
+-   CRAN submission following article submission in MEE
+
 SSDM 0.2.2.9002
 ===============
 
diff --git a/cran-comment.md b/cran-comment.md
index d686566..ed939c9 100644
--- a/cran-comment.md
+++ b/cran-comment.md
@@ -1,6 +1,8 @@
 ## Test environments
 * local Ubuntu 14.04 LTS, R 3.2.2
 * local Windows 7, R 3.2.2
+* Travis CI Ubuntu 14.04.5 LTS, R 3.4.0
+* AppVeyor Windows Server 2012, R 3.3.3
 * win-builder (devel and release)
 
 ## R CMD check results
@@ -20,4 +22,6 @@ Those are scientific correctly spelled words of species distribution modelling f
 ## Resubmission
 This is a resubmission. In this version I have:
 
-* Still an issue with graphical user interface, shiny was not loaded by the UI. Bug is now fixed.
+* Added two vignettes (for the main workflow and the use of the user interface)
+* Corrected the english in description, documentations, vignettes and user interface with three different reviewers
+* Made all the modifications requested by anonymous reviewers of a peer reviewed scientific journal in which the package is being published
diff --git a/inst/shiny/gui/ui.R b/inst/shiny/gui/ui.R
index 589762b..98ba447 100644
--- a/inst/shiny/gui/ui.R
+++ b/inst/shiny/gui/ui.R
@@ -59,7 +59,7 @@ ui <- dashboardPage(dashboardHeader(title = 'SSDM'),
                                         uiOutput('Pcol'),
                                         checkboxInput('GeoRes', 'Geographic resampling', value = TRUE),
                                         uiOutput('reso'),
-                                        p('Geographical thinning can be performed on occurrences to limit geographical biases in the SDMs.'),
+                                        p('Randomize occurrences so that they will at least be separated by a user-specified distance to reduce the effect of biased occurrence collections on SDM outcomes'),
                                         actionButton('load2', 'Load')),
                                     box(title = 'Preview',
                                         dataTableOutput('occ')