sNMO/pyproject.toml at main · smestern/sNMO · GitHub

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[build-system]
requires = ["setuptools>=68.0", "wheel"]
build-backend = "setuptools.build_meta"

[project]
name = "sNMO"
dynamic = ["version"]
description = "Single neuron model optimizer — fitting single neuron traces from patch-clamp recordings"
readme = "README.md"
requires-python = ">=3.9"
license = {text = "MIT"}
authors = [
    {name = "smestern"},
]
keywords = ["neuroscience", "neuron", "model", "optimization", "patch-clamp", "brian2"]

dependencies = [
    "Brian2>=2.5.4",
    "elephant>=1.0.0",
    "joblib>=1.2.0",
    "matplotlib>=3.7.2",
    "neo>=0.13.0",
    "networkx>=3.1",
    "nevergrad>=1.0.0",
    "numpy",
    "pandas>=2.0.3",
    "POT>=0.9.3",
    "pyabf",
    "pynwb",
    "scikit-optimize>=0.9.0",
    "scipy>=1.11.1",
]

[project.optional-dependencies]
sbi = [
    "sbi>=0.21.0",
    "torch>=2.1.0",
]
ax = [
    "ax-platform",
    "torch>=2.1.0",
]
dev = [
    "pytest",
    "flake8",
]

[tool.setuptools.dynamic]
version = {attr = "sNMO.__version__"}

[tool.setuptools.packages.find]
include = ["sNMO*"]

[tool.setuptools.package-data]
sNMO = ["*.json", "*.npy"]