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I encountered a problem today using sq.pl.spatial_scatter, I have to use lowres image in my object, so I see the docstring said - Use ``img_key`` to display the image in the background.
- Use ``img_key`` to display the image in the background.
but when I specified img_key in sq.pl.spatial_scatter, I encountered error saying that it is not a valid parameter.
So I looked into the source code, and found sq.pl.spatial_scatter calls _spatial_plot
I encountered a problem today using
sq.pl.spatial_scatter
, I have to uselowres
image in my object, so I see the docstring said- Use ``img_key`` to display the image in the background.
squidpy/src/squidpy/pl/_spatial.py
Line 392 in e6b5b0c
but when I specified img_key in
sq.pl.spatial_scatter
, I encountered error saying that it is not a valid parameter.So I looked into the source code, and found
sq.pl.spatial_scatter
calls_spatial_plot
squidpy/src/squidpy/pl/_spatial.py
Line 47 in e6b5b0c
in which the real parameter is named
img_res_key
squidpy/src/squidpy/pl/_spatial.py
Line 57 in e6b5b0c
but the docstring of
_spatial_plot
saysimg_key
as wellsquidpy/src/squidpy/pl/_spatial.py
Line 143 in e6b5b0c
I wanted to submit a pr because this seems a simple fix, just fix the docstring would be good, but when I grep the code base I found
There seem to be a major name inconsistency, and I don't know what is the intended name in opinion of your team, so I gave up and file an issue.
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