Skip to content

Commit bd8bfaa

Browse files
committed
nf-core module updates
1 parent 1f18dad commit bd8bfaa

28 files changed

+1741
-252
lines changed

modules.json

Lines changed: 49 additions & 19 deletions
Original file line numberDiff line numberDiff line change
@@ -8,83 +8,113 @@
88
"agat/spstatistics": {
99
"branch": "master",
1010
"git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
11-
"installed_by": ["modules"]
11+
"installed_by": [
12+
"modules"
13+
]
1214
},
1315
"agat/sqstatbasic": {
1416
"branch": "master",
1517
"git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
16-
"installed_by": ["modules"]
18+
"installed_by": [
19+
"modules"
20+
]
1721
},
1822
"bedtools/bamtobed": {
1923
"branch": "master",
2024
"git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
21-
"installed_by": ["modules"]
25+
"installed_by": [
26+
"modules"
27+
]
2228
},
2329
"busco/busco": {
2430
"branch": "master",
2531
"git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
26-
"installed_by": ["modules"],
32+
"installed_by": [
33+
"modules"
34+
],
2735
"patch": "modules/nf-core/busco/busco/busco-busco.diff"
2836
},
2937
"cooler/cload": {
3038
"branch": "master",
3139
"git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
32-
"installed_by": ["modules"]
40+
"installed_by": [
41+
"modules"
42+
]
3343
},
3444
"cooler/dump": {
3545
"branch": "master",
3646
"git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
37-
"installed_by": ["modules"]
47+
"installed_by": [
48+
"modules"
49+
]
3850
},
3951
"cooler/zoomify": {
4052
"branch": "master",
4153
"git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
42-
"installed_by": ["modules"]
54+
"installed_by": [
55+
"modules"
56+
]
4357
},
4458
"custom/dumpsoftwareversions": {
4559
"branch": "master",
4660
"git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
47-
"installed_by": ["modules"]
61+
"installed_by": [
62+
"modules"
63+
]
4864
},
4965
"fastk/fastk": {
5066
"branch": "master",
51-
"git_sha": "0f8a77ff00e65eaeebc509b8156eaa983192474b",
52-
"installed_by": ["modules"],
67+
"git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
68+
"installed_by": [
69+
"modules"
70+
],
5371
"patch": "modules/nf-core/fastk/fastk/fastk-fastk.diff"
5472
},
5573
"gffread": {
5674
"branch": "master",
5775
"git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
58-
"installed_by": ["modules"]
76+
"installed_by": [
77+
"modules"
78+
]
5979
},
6080
"gnu/sort": {
6181
"branch": "master",
6282
"git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
63-
"installed_by": ["modules"]
83+
"installed_by": [
84+
"modules"
85+
]
6486
},
6587
"gunzip": {
6688
"branch": "master",
6789
"git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
68-
"installed_by": ["modules"]
90+
"installed_by": [
91+
"modules"
92+
]
6993
},
7094
"merquryfk/merquryfk": {
7195
"branch": "master",
72-
"git_sha": "0f8a77ff00e65eaeebc509b8156eaa983192474b",
73-
"installed_by": ["modules"],
96+
"git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
97+
"installed_by": [
98+
"modules"
99+
],
74100
"patch": "modules/nf-core/merquryfk/merquryfk/merquryfk-merquryfk.diff"
75101
},
76102
"multiqc": {
77103
"branch": "master",
78-
"git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
79-
"installed_by": ["modules"]
104+
"git_sha": "cf17ca47590cc578dfb47db1c2a44ef86f89976d",
105+
"installed_by": [
106+
"modules"
107+
]
80108
},
81109
"samtools/view": {
82110
"branch": "master",
83111
"git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
84-
"installed_by": ["modules"]
112+
"installed_by": [
113+
"modules"
114+
]
85115
}
86116
}
87117
}
88118
}
89119
}
90-
}
120+
}

modules/nf-core/fastk/fastk/environment.yml

Lines changed: 5 additions & 0 deletions
Some generated files are not rendered by default. Learn more about customizing how changed files appear on GitHub.

modules/nf-core/fastk/fastk/fastk-fastk.diff

Lines changed: 3 additions & 12 deletions
Some generated files are not rendered by default. Learn more about customizing how changed files appear on GitHub.

modules/nf-core/fastk/fastk/main.nf

Lines changed: 40 additions & 7 deletions
Some generated files are not rendered by default. Learn more about customizing how changed files appear on GitHub.

modules/nf-core/fastk/fastk/meta.yml

Lines changed: 47 additions & 34 deletions
Some generated files are not rendered by default. Learn more about customizing how changed files appear on GitHub.

0 commit comments

Comments
 (0)