diff --git a/run_pipeline b/run_pipeline
index 1f0b996..ec344a8 100755
--- a/run_pipeline
+++ b/run_pipeline
@@ -4,4 +4,4 @@
 
 pipelineDir=$(dirname -- "$(readlink -f -- "$0")")
 
-$pipelineDir/nextflow -C $pipelineDir/nextflow.config run $pipelineDir/main.nf "$@"
\ No newline at end of file
+$pipelineDir/nextflow -C $pipelineDir/nextflow.config run -w $pipelineDir/work $pipelineDir/main.nf "$@"
\ No newline at end of file