diff --git a/_posts/2023-11-03-snakemake.md b/_posts/2023-11-03-snakemake.md index e57fb3d..fe54053 100644 --- a/_posts/2023-11-03-snakemake.md +++ b/_posts/2023-11-03-snakemake.md @@ -9,9 +9,21 @@ external_media: https://rseng.github.io/devstories-episodes-2/2023/devstories-jo length: 25066352 duration: "00:44:37" explicit: "no" +resources: + - name: Köster Lab + url: https://koesterlab.github.io/ + - name: Johannes on GitHub + url: https://github.com/johanneskoester + - name: Johannes on Twitter/X + url: https://twitter.com/johanneskoester + - name: The Snakemake Paper + url: https://f1000research.com/articles/10-33 + - name: Snakemake on GitHub + url: https://github.com/snakemake/snakemake + - name: Snakemake Documentation + url: https://snakemake.readthedocs.io/en/stable/ + - name: Snakemake Workflow Catalog + url: https://snakemake.github.io/snakemake-workflow-catalog/ --- -In this 91st episode we talk with the benevolent dictator and creator of Snakemake Johannes Köster, who not only continues to be a leader in the bioinformatics community for software, -but also is Group leader in Computer Science and Bioinformatics at the University of Duisburg-Essen, Germany. In this episode we hear the founding story of Snakemake and how Johannes sees -his role changing, the Snakemake software changing, and exciting changes coming with Snakemake 8! 🐍️ How often do we refactor code as developers? How do we think (or work) through a design -process? What are good strategies for publishing research software, and over a long period of time? Have you heard of F1000 Research? Listen to this week's episode to find out! +In this 91st episode we talk with the benevolent dictator and creator of Snakemake Johannes Köster, who not only continues to be a leader in the bioinformatics community for software, but also is Group leader in Computer Science and Bioinformatics at the University of Duisburg-Essen, Germany. In this episode we hear the founding story of Snakemake and how Johannes sees his role changing, the Snakemake software changing, and exciting changes coming with Snakemake 8! 🐍️ How often do we refactor code as developers? How do we think (or work) through a design process? What are good strategies for publishing research software, and over a long period of time? Have you heard of F1000 Research? Listen to this week's episode to find out!