Small typo under Adapter content section

[SergeWielhouwer]

Hi Ruben,

In the adapter content section of the HTML report, I noticed that there is a small typo at the start (v0.12.0).
For nanopore the the adapter mix (AMX) and ligation kit have overlapping adapter sequences and are therefore indistinguishable. Please consult the nanopore documentation for more information which adapters are used by your kit.

Really nice tool btw :). I am impressed by its performance, especially how ISA-L really helps when working with larger compressed FASTQ datasets.

Best,

Serge

[rhpvorderman]

Thanks! I will put this on my todo list.

Really nice tool btw :). I am impressed by its performance, especially how ISA-L really helps when working with larger compressed FASTQ datasets.

Thanks for the compliment. I noticed when I was doing some benchmarking in 2020 that a lot of tool runtime was spent on (de)compressing files. Simply setting the compression level for most tools to 1 saves so much time. Most tools actually seem like compression tools with a bioinformatic side effect at compression level 5.
ISA-L does wonders indeed. I had to do some work to get it running in an additional thread, but for someone as impatient as me it was certainly worth it in wall clock time!