Merge remote-tracking branch 'origin/main' into avoid_samp_obs

Author: Kevin2

.github/workflows/ci.yml

@@ -39,31 +39,37 @@ jobs:
           fetch-depth: 0
 
       - name: Prepare mamba installation
-        if: matrix.install-method == 'mamba'
+        if: matrix.install-method == 'mamba' &&  contains(github.event.pull_request.labels.*.name, 'documentation-only') == false
         env:
           PYTHON_VERSION: ${{ matrix.python-version }}
         run: |
           # setup correct python version
           sed -i -e "s/- python.*/- python=$PYTHON_VERSION/g" environment.yml
 
       - name: mamba setup
-        if: matrix.install-method == 'mamba'
+        if: matrix.install-method == 'mamba' &&  contains(github.event.pull_request.labels.*.name, 'documentation-only') == false
         uses: mamba-org/setup-micromamba@v1
+        with:
+          environment-file: environment.yml
+          cache-downloads: true
 
       - name: Install dependencies
+        env:
+          PYTHON_VERSION: ${{ matrix.python-version }}
         run: |
           python --version
           pip install pytest-cov restructuredtext-lint pytest-xdist 'coverage!=6.3.0'
-          pip install .[all]
+          pip install -e .[all]
           pip freeze
+          pip list
 
       - name: List installed package versions (conda)
         if: matrix.environment-type == 'mamba'
         run: micromamba list
 
       - name: Tests
         run: |
-          py.test --cov --cov-report=xml
+          pytest --cov --cov-report=xml
 
       - name: Upload coverage to Codecov
         uses: codecov/codecov-action@v4

docs/changes/35.maintenance.rst

@@ -0,0 +1 @@
+- switch from setup.py to pyproject.toml

environment.yml

@@ -1,15 +1,18 @@
----
+# A conda environment with all useful packages for pyvisgen developers
 name: pyvisgen
 channels:
     - pytorch
     - defaults
     - conda-forge
 dependencies:
   - python
+  - astropy<=6.1.0
   - pytorch
   - numpy
+  - matplotlib
   - pip
-  - pip:
-    - towncrier
-    - astropy==6.1.0
-    - -e .
+  - towncrier
+  - jupyter
+  - pytest
+  - pytest-cov
+  - pytest-runner

pyproject.toml

@@ -0,0 +1,94 @@
+[build-system]
+requires = ["setuptools>=64", "setuptools_scm[toml]>=8"]
+build-backend = "setuptools.build_meta"
+
+[project]
+name = "pyvisgen"
+version = "0.2.0"
+description = "Simulate radio interferometer observations and visibility generation with the RIME formalism."
+readme = "README.md"
+authors = [
+    {name = "Kevin Schmidt, Felix Geyer, Stefan Fröse"},
+]
+maintainers = [
+    {name = "Kevin Schmidt", email = "[email protected]"},
+    {name = "Felix Geyer", email = "[email protected]"},
+]
+license = {text = "MIT"}
+classifiers = [
+    "Intended Audience :: Science/Research",
+    "License :: OSI Approved :: MIT License",
+    "Programming Language :: Python :: 3",
+    "Programming Language :: Python :: 3.10",
+    "Programming Language :: Python :: 3.11",
+    "Topic :: Scientific/Engineering :: Astronomy",
+    "Topic :: Scientific/Engineering :: Physics",
+    "Topic :: Scientific/Engineering :: Information Analysis",
+    "Development Status :: 4 - Beta",
+]
+
+requires-python = ">=3.10"
+
+dependencies = [
+    "numpy",
+    "astropy<=6.1.0",
+    "torch",
+    "matplotlib",
+    "ipython",
+    "scipy",
+    "pandas",
+    "toml",
+    "pytest",
+    "pytest-cov",
+    "jupyter",
+    "astroplan",
+    "torch",
+    "tqdm",
+    "numexpr",
+    "click",
+    "h5py",
+    "natsort",
+    "pre-commit",
+]
+
+[project.scripts]
+    pyvisgen_create_dataset = "pyvisgen.simulation.scripts.create_dataset:main"
+
+[tool.setuptools.packages.find]
+    where = ["pyvisgen"]
+
+[tool.towncrier]
+    package = "ctapipe"
+    directory = "docs/changes"
+    filename = "CHANGES.rst"
+    template = "docs/changes/template.rst"
+    # let towncrier create proper links to the merged PR
+    issue_format = "`#{issue} <https://github.com/cta-observatory/ctapipe/pull/{issue}>`__"
+
+    [tool.towncrier.fragment.feature]
+        name = "New Features"
+        showcontent = true
+
+    [tool.towncrier.fragment.bugfix]
+        name = "Bug Fixes"
+        showcontent = true
+
+    [tool.towncrier.fragment.api]
+        name = "API Changes"
+        showcontent = true
+
+    [tool.towncrier.fragment.datamodel]
+        name = "Data Model Changes"
+        showcontent = true
+
+    [tool.towncrier.fragment.optimization]
+        name = "Refactoring and Optimization"
+        showcontent = true
+
+    [tool.towncrier.fragment.maintenance]
+        name = "Maintenance"
+        showcontent = true
+
+    [[tool.towncrier.section]]
+        name = ""
+        path = ""