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Merge pull request #191 from pynapple-org/dev
Bumping v0.4.0
2 parents 18edda3 + cbf7437 commit ed86795

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README.md

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@@ -30,26 +30,18 @@ pynapple is a light-weight python library for neurophysiological data analysis.
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:fire::fire::fire::fire::fire::fire::fire::fire: New release :fire::fire::fire::fire::fire::fire::fire::fire::fire::fire:
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---------------
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The version 0.4 of pynapple will rely on the [numpy array container](https://numpy.org/doc/stable/user/basics.dispatch.html) approach instead of Pandas. Pynapple builtin functions will remain the same except for functions inherited from Pandas. Typically this line of code in `pynapple<=0.3.6` :
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Starting with 0.4, pynapple rely on the [numpy array container](https://numpy.org/doc/stable/user/basics.dispatch.html) approach instead of Pandas. Pynapple builtin functions will remain the same except for functions inherited from Pandas. Typically this line of code in `pynapple<=0.3.6` :
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```python
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meantsd = tsdframe.mean(1)
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```
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is now:
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```python
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meantsd = np.mean(tsdframe, 1)
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```
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in `pynapple>=0.4.0`. This allows for a better handling of returned objects.
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Additionaly, it is now possible to define time series objects with more than 2 dimensions with `TsdTensor`. You can also look at this [notebook](https://pynapple-org.github.io/pynapple/generated/gallery/tutorial_pynapple_numpy/) for a demonstration of numpy compatibilities.
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To install the pre-release version:
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``` {.sourceCode .shell}
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$ conda create --name pynapple pip python=3.8
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$ conda activate pynapple
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$ pip install --pre pynapple
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```
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:fire::fire::fire::fire::fire::fire::fire::fire::fire::fire::fire::fire::fire::fire::fire::fire::fire::fire::fire::fire::fire::fire::fire:
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---------------
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docs/index.md

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@@ -24,11 +24,11 @@ pynapple is a light-weight python library for neurophysiological data analysis.
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:fire::fire::fire::fire::fire::fire::fire::fire: New release :fire::fire::fire::fire::fire::fire::fire::fire::fire::fire:
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---------------
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The version 0.4 of pynapple will rely on the [numpy array container](https://numpy.org/doc/stable/user/basics.dispatch.html) approach instead of Pandas. Pynapple builtin functions will remain the same except for functions inherited from Pandas. Typically this line of code in `pynapple<=0.3.6` :
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Starting with 0.4, pynapple rely on the [numpy array container](https://numpy.org/doc/stable/user/basics.dispatch.html) approach instead of Pandas. Pynapple builtin functions will remain the same except for functions inherited from Pandas. Typically this line of code in `pynapple<=0.3.6` :
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```python
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meantsd = tsdframe.mean(1)
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```
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will now be :
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is now :
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```python
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meantsd = np.mean(tsdframe, 1)
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```

pyproject.toml

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@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
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[project]
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name = "pynapple"
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version = "0.4.0a1"
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version = "0.4.0"
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description = "PYthon Neural Analysis Package Pour Laboratoires d’Excellence"
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readme = "README.md"
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authors = [{ name = "Guillaume Viejo", email = "[email protected]" }]

setup.py

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],
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description="PYthon Neural Analysis Package Pour Laboratoires d’Excellence",
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install_requires=requirements,
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license="GNU General Public License v3",
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license="MIT License",
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# long_description='pynapple is a Python library for analysing neurophysiological data. It allows to handle time series and epochs but also to use generic functions for neuroscience such as tuning curves and cross-correlogram of spikes. It is heavily based on neuroseries.'
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# + '\n\n' + history,
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long_description=readme,
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test_suite='tests',
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tests_require=test_requirements,
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url='https://github.com/pynapple-org/pynapple',
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version='v0.4.0a1',
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version='v0.4.0',
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zip_safe=False,
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long_description_content_type='text/markdown',
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download_url='https://github.com/pynapple-org/pynapple/archive/refs/tags/v0.4.0a1.tar.gz'
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download_url='https://github.com/pynapple-org/pynapple/archive/refs/tags/v0.4.0.tar.gz'
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)

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