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zhibor opened this issue
Jun 17, 2022
· 0 comments
Labels
Status: Needs TriageShould be the default status for issues that have been acknowledged, but not yet processed.Type: BugIndicates that WebProtege is not working as expected
WebProtege Initialization Error
An error occurred during the initialization of WebProtege which prevented WebProtege from starting.
Error Message
java.nio.file.NoSuchFileException: /srv/protege/webprotege-data/data-store/project-data/0b6dcf4c-0ed4-4b80-9955-3117cd6333a2/change-data/change-data.binary
at java.base/sun.nio.fs.UnixException.translateToIOException(UnixException.java:92)
at java.base/sun.nio.fs.UnixException.rethrowAsIOException(UnixException.java:111)
at java.base/sun.nio.fs.UnixException.rethrowAsIOException(UnixException.java:116)
at java.base/sun.nio.fs.UnixFileSystemProvider.newByteChannel(UnixFileSystemProvider.java:219)
at java.base/java.nio.file.Files.newByteChannel(Files.java:371)
at java.base/java.nio.file.Files.newByteChannel(Files.java:422)
at java.base/java.nio.file.spi.FileSystemProvider.newInputStream(FileSystemProvider.java:420)
at java.base/java.nio.file.Files.newInputStream(Files.java:156)
at edu.stanford.bmir.protege.web.server.revision.HeadRevisionNumberFinder.getHeadRevisionNumber(HeadRevisionNumberFinder.java:50)
at edu.stanford.bmir.protege.web.server.download.ProjectDownloadService.getHeadRevisionNumber(ProjectDownloadService.java:214)
at edu.stanford.bmir.protege.web.server.download.ProjectDownloadService.downloadProject(ProjectDownloadService.java:84)
at edu.stanford.bmir.protege.web.server.download.ProjectDownloadServlet.startProjectDownload(ProjectDownloadServlet.java:91)
at edu.stanford.bmir.protege.web.server.download.ProjectDownloadServlet.doGet(ProjectDownloadServlet.java:81)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:624)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
at edu.stanford.bmir.protege.web.server.filter.WebProtegeWebAppFilter.doFilter(WebProtegeWebAppFilter.java:75)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:218)
at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:110)
at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:498)
at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:169)
at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:103)
at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:962)
at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:445)
at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1091)
at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
at org.apache.tomcat.util.net.AprEndpoint$SocketProcessor.doRun(AprEndpoint.java:2549)
at org.apache.tomcat.util.net.AprEndpoint$SocketProcessor.run(AprEndpoint.java:2538)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
at java.base/java.lang.Thread.run(Thread.java:829)
Expected behavior
Expect to export/download an ontology
Desktop (please complete the following information):
OS: macOS
Browser: Chrome, Safari
Version: most recent
Additional context
None
The text was updated successfully, but these errors were encountered:
zhibor
added
Status: Needs Triage
Should be the default status for issues that have been acknowledged, but not yet processed.
Type: Bug
Indicates that WebProtege is not working as expected
labels
Jun 17, 2022
Status: Needs TriageShould be the default status for issues that have been acknowledged, but not yet processed.Type: BugIndicates that WebProtege is not working as expected
Describe the bug
Download project errors
To Reproduce
Steps to reproduce the behavior:
Expected behavior
Expect to export/download an ontology
Desktop (please complete the following information):
Additional context
None
The text was updated successfully, but these errors were encountered: