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test_cusparse.cu
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test_cusparse.cu
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#include "rpma.cuh"
#include "util.cuh"
#include <iostream>
#include <fstream>
#include <vector>
#include <algorithm>
#include <utility>
#include <cstring>
#include "cusparse.h"
using namespace std;
__global__
void key_copy_kernel(KEY_TYPE *keys, SIZE_TYPE* rowidx, SIZE_TYPE *colidx, SIZE_TYPE size) {
SIZE_TYPE global_thread_id = blockDim.x * blockIdx.x + threadIdx.x;
SIZE_TYPE block_offset = gridDim.x * blockDim.x;
for (SIZE_TYPE i = global_thread_id; i < size; i += block_offset) {
rowidx[i] = (keys[i] >> 32);
colidx[i] = keys[i];
}
}
vector<string> datasets;
bool
test_update(thrust::host_vector<KEY_TYPE> &h_keys, SIZE_TYPE node_num, SIZE_TYPE edge_num, SIZE_TYPE group_num) {
KEY_TYPE t = 0;
SIZE_TYPE std_group_size = (edge_num + group_num - 1) / group_num;
int cnt = 0;
int i;
for (i = 0; i < group_num; ++i) {
SIZE_TYPE ed = min((i + 1) * std_group_size, edge_num);
if (ed == edge_num)
++cnt;
if (cnt)
break;
DEV_VEC_SIZE coo_rowidx(ed);
DEV_VEC_SIZE coo_colidx(ed, 0);
DEV_VEC_KEY d_keys(ed);
cErr(cudaDeviceSynchronize());
cErr(cudaMemcpy(RAW_PTR(d_keys), RAW_PTR(h_keys), sizeof(KEY_TYPE) * ed, cudaMemcpyHostToDevice));
TimeKeeper t1;
cErr(cudaDeviceSynchronize());
thrust::sort(d_keys.begin(), d_keys.end());
cErr(cudaDeviceSynchronize());
t += t1.checkTime("");
key_copy_kernel<<<256, 256>>>(RAW_PTR(d_keys), RAW_PTR(coo_rowidx), RAW_PTR(coo_colidx), ed);
DEV_VEC_SIZE csr_rowoffset(node_num + 1);
cusparseStatus_t status;
cusparseHandle_t handle = 0;
cusparseMatDescr_t descr = 0;
status= cusparseCreate(&handle);
if (status != CUSPARSE_STATUS_SUCCESS) assert(0);
status= cusparseCreateMatDescr(&descr);
if (status != CUSPARSE_STATUS_SUCCESS) assert(0);
cusparseSetMatType(descr,CUSPARSE_MATRIX_TYPE_GENERAL);
cusparseSetMatIndexBase(descr,CUSPARSE_INDEX_BASE_ZERO);
TimeKeeper t2;
cErr(cudaDeviceSynchronize());
status= cusparseXcoo2csr(handle, (int *)RAW_PTR(coo_rowidx), ed, node_num,
(int *)RAW_PTR(csr_rowoffset), CUSPARSE_INDEX_BASE_ZERO);
if (status != CUSPARSE_STATUS_SUCCESS) assert(0);
cErr(cudaDeviceSynchronize());
t += t2.checkTime("");
}
cout << t/i << endl;
return true;
}
void
read_edgelist(string &filename, thrust::host_vector<KEY_TYPE> &h_keys, SIZE_TYPE &node_num, SIZE_TYPE &edge_num, SIZE_TYPE edge_n) {
ifstream e_file;
e_file.open((filename + ".edgelist").c_str());
e_file >> node_num;
e_file >> edge_num;
if (edge_n)
edge_num = edge_n;
for (int i = 0; i < edge_num; ++i) {
KEY_TYPE src, dst;
e_file >> src;
e_file >> dst;
assert(src < node_num && dst < node_num);
h_keys.push_back(src<<32 | dst);
}
e_file.close();
}
void
test_all(string dataset, SIZE_TYPE edge_n, SIZE_TYPE group_n) {
cout << "reading edgelist and timestamps" << endl;
SIZE_TYPE node_num, edge_num;
thrust::host_vector<KEY_TYPE> h_keys;
read_edgelist(dataset, h_keys, node_num, edge_num, edge_n);
cout << "node num is:" << node_num << ", edge num is:" << edge_num << endl;
if (test_update(h_keys, node_num, edge_num, group_n))
cout << "query and update with timestamp test success" << endl;
else {
cout << "query and update with timestamp test fail" << endl;
return;
}
}
int
main(int args, char *argv[]) {
SIZE_TYPE edge_num = atoi(argv[1]);
SIZE_TYPE group_num = atoi(argv[2]);
cErr(cudaDeviceSynchronize());
cErr(cudaDeviceSetLimit(cudaLimitMallocHeapSize, 1048*1024*1024));
cErr(cudaDeviceSynchronize());
//datasets.push_back("pokec");
datasets.push_back("livejournal");
//datasets.push_back("graph500");
for (auto dataset = datasets.begin(); dataset != datasets.end(); ++dataset) {
cout << "testing " << *dataset << endl;
test_all(string("../edgelists/") + *dataset, edge_num, group_num);
}
return 0;
}