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[0.5.0] - 2024-11-27

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@mattheww95 mattheww95 released this 27 Nov 18:03
0.5.0
ddf5f2b
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[0.5.0] - 2024-11-27

Added

  • Added RASUSA for down sampling of Nanopore or PacBio data. PR 125

  • Added a new sample_name field to the schema_input.json file: PR 140

  • Incorporated a --skip_read_merging parameter to prevent read merging PR 140

Changed

  • Added a sample_name field, sample still exists but is used to incorporate additional names/identifiers in IRIDANext PR 140

  • RASUSA now used for down sampling of Nanopore or PacBio data. PR 125

  • Default Listeria quality control parameters apply only to monocytogenes now. PR 142

Updated

  • Documentation and workflow diagram has been updated. PR 123

  • Documentation and Readme has been updated. PR 126

  • Adjusted schema_input.json to allow for non-gzipped inputs. PR 137

  • Updated github actions workflows for nf-core version 3.0.1. PR 137

Thank you to: @apetkau, @sgsutcliffe and @kylacochrane for all your contributions!

Contributors

apetkau, kylacochrane, and sgsutcliffe
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