Refactor ParticleType to use PDG Monte Carlo numbering scheme #7562
Workflow file for this run
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| name: Tests and Coverage | |
| on: | |
| # allows us to run workflows manually | |
| workflow_dispatch: | |
| pull_request: | |
| branches: | |
| - develop | |
| - master | |
| push: | |
| branches: | |
| - develop | |
| - master | |
| env: | |
| MPI_DIR: /usr | |
| HDF5_ROOT: /usr | |
| OMP_NUM_THREADS: 2 | |
| COVERALLS_PARALLEL: true | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| jobs: | |
| filter-changes: | |
| runs-on: ubuntu-latest | |
| outputs: | |
| source_changed: ${{ steps.filter.outputs.source_changed }} | |
| steps: | |
| - name: Check out the repository | |
| uses: actions/checkout@v4 | |
| - name: Examine changed files | |
| id: filter | |
| uses: dorny/paths-filter@668c092af3649c4b664c54e4b704aa46782f6f7c # latest master commit, not released yet | |
| with: | |
| filters: | | |
| source_changed: | |
| - '!docs/**' | |
| - '!**/*.md' | |
| predicate-quantifier: 'every' | |
| main: | |
| needs: filter-changes | |
| if: ${{ needs.filter-changes.outputs.source_changed == 'true' }} | |
| runs-on: ubuntu-22.04 | |
| strategy: | |
| matrix: | |
| python-version: ["3.11"] | |
| mpi: [n, y] | |
| omp: [n, y] | |
| dagmc: [n] | |
| libmesh: [n] | |
| event: [n] | |
| vectfit: [n] | |
| include: | |
| - python-version: "3.12" | |
| omp: n | |
| mpi: n | |
| - python-version: "3.13" | |
| omp: n | |
| mpi: n | |
| - dagmc: y | |
| python-version: "3.11" | |
| mpi: y | |
| omp: y | |
| - libmesh: y | |
| python-version: "3.11" | |
| mpi: y | |
| omp: y | |
| - libmesh: y | |
| python-version: "3.11" | |
| mpi: n | |
| omp: y | |
| - event: y | |
| python-version: "3.11" | |
| omp: y | |
| mpi: n | |
| - vectfit: y | |
| python-version: "3.11" | |
| omp: n | |
| mpi: y | |
| name: "Python ${{ matrix.python-version }} (omp=${{ matrix.omp }}, | |
| mpi=${{ matrix.mpi }}, dagmc=${{ matrix.dagmc }}, | |
| libmesh=${{ matrix.libmesh }}, event=${{ matrix.event }} | |
| vectfit=${{ matrix.vectfit }})" | |
| env: | |
| MPI: ${{ matrix.mpi }} | |
| PHDF5: ${{ matrix.mpi }} | |
| OMP: ${{ matrix.omp }} | |
| DAGMC: ${{ matrix.dagmc }} | |
| EVENT: ${{ matrix.event }} | |
| VECTFIT: ${{ matrix.vectfit }} | |
| LIBMESH: ${{ matrix.libmesh }} | |
| NPY_DISABLE_CPU_FEATURES: "AVX512F AVX512_SKX" | |
| OPENBLAS_NUM_THREADS: 1 | |
| PYTEST_ADDOPTS: --cov=openmc --cov-report=lcov:coverage-python.lcov | |
| # libfabric complains about fork() as a result of using Python multiprocessing. | |
| # We can work around it with RDMAV_FORK_SAFE=1 in libfabric < 1.13 and with | |
| # FI_EFA_FORK_SAFE=1 in more recent versions. | |
| RDMAV_FORK_SAFE: 1 | |
| steps: | |
| - name: Setup cmake | |
| uses: jwlawson/actions-setup-cmake@v2 | |
| with: | |
| cmake-version: '3.31' | |
| - name: Checkout repository | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Environment Variables | |
| run: | | |
| echo "OPENMC_CROSS_SECTIONS=$HOME/nndc_hdf5/cross_sections.xml" >> $GITHUB_ENV | |
| echo "OPENMC_ENDF_DATA=$HOME/endf-b-vii.1" >> $GITHUB_ENV | |
| # get the sha of the last branch commit | |
| # for push and workflow_dispatch events, use the current reference head | |
| BRANCH_SHA=HEAD | |
| # for a pull_request event, use the last reference of the parents of the merge commit | |
| if [ "${{ github.event_name }}" == "pull_request" ]; then | |
| BRANCH_SHA=$(git rev-list --parents -n 1 HEAD | rev | cut -d" " -f 1 | rev) | |
| fi | |
| COMMIT_MESSAGE=$(git log $BRANCH_SHA -1 --pretty=%B | tr '\n' ' ') | |
| echo ${COMMIT_MESSAGE} | |
| echo "COMMIT_MESSAGE=${COMMIT_MESSAGE}" >> $GITHUB_ENV | |
| - name: Apt dependencies | |
| shell: bash | |
| run: | | |
| sudo apt -y update | |
| sudo apt install -y libpng-dev \ | |
| libnetcdf-dev \ | |
| libpnetcdf-dev \ | |
| libhdf5-serial-dev \ | |
| libeigen3-dev | |
| - name: Optional apt dependencies for MPI | |
| shell: bash | |
| if: ${{ matrix.mpi == 'y' }} | |
| run: | | |
| sudo apt install -y libhdf5-mpich-dev \ | |
| libmpich-dev | |
| sudo update-alternatives --set mpi /usr/bin/mpicc.mpich | |
| sudo update-alternatives --set mpirun /usr/bin/mpirun.mpich | |
| sudo update-alternatives --set mpi-x86_64-linux-gnu /usr/include/x86_64-linux-gnu/mpich | |
| - name: Optional apt dependencies for vectfit | |
| shell: bash | |
| if: ${{ matrix.vectfit == 'y' }} | |
| run: sudo apt install -y libblas-dev liblapack-dev | |
| - name: install | |
| shell: bash | |
| run: | | |
| echo "$HOME/NJOY2016/build" >> $GITHUB_PATH | |
| $GITHUB_WORKSPACE/tools/ci/gha-install.sh | |
| - name: display-config | |
| shell: bash | |
| run: | | |
| openmc -v | |
| - name: cache-xs | |
| uses: actions/cache@v4 | |
| with: | |
| path: | | |
| ~/nndc_hdf5 | |
| ~/endf-b-vii.1 | |
| key: ${{ runner.os }}-build-xs-cache-${{ hashFiles(format('{0}/tools/ci/download-xs.sh', github.workspace)) }} | |
| - name: before | |
| shell: bash | |
| run: $GITHUB_WORKSPACE/tools/ci/gha-before-script.sh | |
| - name: test | |
| shell: bash | |
| run: | | |
| CTEST_OUTPUT_ON_FAILURE=1 make test -C $GITHUB_WORKSPACE/build/ | |
| $GITHUB_WORKSPACE/tools/ci/gha-script.sh | |
| - name: Setup tmate debug session | |
| continue-on-error: true | |
| if: ${{ contains(env.COMMIT_MESSAGE, '[gha-debug]') }} | |
| uses: mxschmitt/action-tmate@v3 | |
| timeout-minutes: 10 | |
| - name: Generate C++ coverage (gcovr) | |
| shell: bash | |
| run: | | |
| # Produce LCOV directly from gcov data in the build tree | |
| gcovr \ | |
| --root "$GITHUB_WORKSPACE" \ | |
| --object-directory "$GITHUB_WORKSPACE/build" \ | |
| --filter "$GITHUB_WORKSPACE/src" \ | |
| --filter "$GITHUB_WORKSPACE/include" \ | |
| --exclude "$GITHUB_WORKSPACE/src/external/.*" \ | |
| --exclude "$GITHUB_WORKSPACE/src/include/openmc/external/.*" \ | |
| --gcov-ignore-errors source_not_found \ | |
| --gcov-ignore-errors output_error \ | |
| --gcov-ignore-parse-errors suspicious_hits.warn \ | |
| --merge-mode-functions=separate \ | |
| --print-summary \ | |
| --lcov -o coverage-cpp.lcov || true | |
| - name: Merge C++ and Python coverage | |
| shell: bash | |
| run: | | |
| # Merge C++ and Python LCOV into a single file for upload | |
| cat coverage-cpp.lcov coverage-python.lcov > coverage.lcov | |
| - name: Upload coverage to Coveralls | |
| if: ${{ hashFiles('coverage.lcov') != '' }} | |
| uses: coverallsapp/github-action@v2 | |
| with: | |
| github-token: ${{ secrets.GITHUB_TOKEN }} | |
| parallel: true | |
| flag-name: C++ and Python | |
| path-to-lcov: coverage.lcov | |
| coverage: | |
| needs: [filter-changes, main] | |
| if: ${{ always() }} | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Coveralls Finished | |
| if: ${{ needs.filter-changes.outputs.source_changed == 'true' }} | |
| uses: coverallsapp/github-action@v2 | |
| with: | |
| github-token: ${{ secrets.GITHUB_TOKEN }} | |
| parallel-finished: true | |
| ci-pass: | |
| needs: [filter-changes, main, coverage] | |
| name: Check CI status | |
| if: ${{ always() }} | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Check CI status | |
| run: | | |
| if [[ "${{ needs.filter-changes.outputs.source_changed }}" == "false" ]]; then | |
| echo "Documentation-only change - CI skipped successfully" | |
| exit 0 | |
| fi | |
| if [[ "${{ needs.main.result }}" == "success" && "${{ needs.coverage.result }}" == "success" ]]; then | |
| echo "CI passed" | |
| exit 0 | |
| fi | |
| echo "CI failed" | |
| exit 1 |