[PRE REVIEW]: eo-tides: Tide modelling tools for large-scale satellite Earth observation analysis

[editorialbot]

Submitting author: @robbibt (Robbi Bishop-Taylor)
Repository: https://github.com/GeoscienceAustralia/eo-tides
Branch with paper.md (empty if default branch):
Version: 0.5.0
Editor: Pending
Reviewers: Pending
Managing EiC: Kristen Thyng

Status

Status badge code:

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Markdown: [![status](https://joss.theoj.org/papers/b5680c39bf831c1159c41a2eb7ec9c5e/status.svg)](https://joss.theoj.org/papers/b5680c39bf831c1159c41a2eb7ec9c5e)

Author instructions

Thanks for submitting your paper to JOSS @robbibt. Currently, there isn't a JOSS editor assigned to your paper.

@robbibt if you have any suggestions for potential reviewers then please mention them here in this thread (without tagging them with an @). You can search the list of people that have already agreed to review and may be suitable for this submission.

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[editorialbot]

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[editorialbot]

Reference check summary (note 'MISSING' DOIs are suggestions that need verification):

✅ OK DOIs

- 10.5281/zenodo.5555395 is OK
- 10.5281/zenodo.3509134 is OK
- 10.25080/Majora-92bf1922-00a is OK
- 10.5334/jors.148 is OK
- 10.26186/145234 is OK
- 10.26186/149403 is OK
- 10.21105/joss.06683 is OK
- 10.1016/j.rse.2021.112734 is OK
- 10.1016/j.ecss.2019.03.006 is OK
- 10.3390/rs10030480 is OK
- 10.1017/cft.2022.4 is OK
- 10.1016/j.coastaleng.2021.103919 is OK
- 10.1016/j.envsoft.2019.104528 is OK

🟡 SKIP DOIs

- No DOI given, and none found for title: opendatacube/odc-geo
- No DOI given, and none found for title: A new barotropic tide model for global ocean: FES2...
- No DOI given, and none found for title: SpatioTemporal Asset Catalog (STAC) specification

❌ MISSING DOIs

- 10.3390/rs4113417 may be a valid DOI for title: Continental scale mapping of tidal flats across Ea...
- 10.1016/j.rse.2017.04.009 may be a valid DOI for title: Extracting the intertidal extent and topography of...
- 10.1016/j.rse.2013.12.019 may be a valid DOI for title: Estuarine suspended particulate matter concentrati...
- 10.2139/ssrn.4858713 may be a valid DOI for title: What time is the tide? The importance of tides for...

❌ INVALID DOIs

- https://doi.org/10.1002/gdj3.174 is INVALID because of 'https://doi.org/' prefix

[editorialbot]

Software report:

github.com/AlDanial/cloc v 1.98  T=0.07 s (626.4 files/s, 319579.0 lines/s)
-------------------------------------------------------------------------------
Language                     files          blank        comment           code
-------------------------------------------------------------------------------
CSV                              2              0              0           8789
Python                          12            577           1522           2280
Jupyter Notebook                 7              0           6981           1318
Markdown                        12            366              3            689
YAML                             7             48             37            344
TeX                              1             20              0            205
TOML                             1             13              0            119
make                             1             16              8             81
CSS                              1              3              3             20
Dockerfile                       1              6              6              9
INI                              1              1              0              4
-------------------------------------------------------------------------------
SUM:                            46           1050           8560          13858
-------------------------------------------------------------------------------

Commit count by author:

   258	Robbi Bishop-Taylor
     1	ClaireP

[editorialbot]

Paper file info:

🚨 Wordcount for paper.md is 2625

✅ The paper includes a Statement of need section

[editorialbot]

License info:

✅ License found: Apache License 2.0 (Valid open source OSI approved license)

[editorialbot]

👉📄 Download article proof 📄 View article proof on GitHub 📄 👈

[editorialbot]

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⚠️ Note to editors: If these papers look like they might be a good match, click through to the review issue for that paper and invite one or more of the authors before considering asking the reviewers of these papers to review again for JOSS.

[kthyng]

Hi @robbibt and thanks for your submission! I am looking for some specific items to make sure your submission fits our requirements at a high level (not at the more detailed review level) before moving on to finding an editor or putting this on our waitlist if no relevant editors are available. I'll comment over time as I have a chance to go through them:

• OSI-approved license
• Installation instructions
• Documentation exists at all
• Tests of some sort
• Check paper (make sure compiles, read through, check for length 250-1000 words)
• Substantial scholarly effort
• Clear research application

In the meantime, please take a look at the comments above ⬆️ from the editorialbot to address any DOI, license, or paper issues if you're able (there may not be any), or suggest reviewers. For reviewers, please suggest 5 reviewers from the database listed above or your own (non-conflicted) extended network. Their github handles are most useful to receive but please don't use "@" to reference them since it will prematurely ping them.

[kthyng]

Please reduce to length of your paper to up to about 1000 words. Paper format information here: https://joss.readthedocs.io/en/latest/paper.html. You can check paper length (and a few other items) with the command @editorialbot check repository though note it needs to be the first item in a comment to run correctly. Currently it has 2625 words.

[robbibt]

@editorialbot commands

[editorialbot]

Hello @robbibt, here are the things you can ask me to do:

# List all available commands
@editorialbot commands

# Get a list of all editors's GitHub handles
@editorialbot list editors

# Adds a checklist for the reviewer using this command
@editorialbot generate my checklist

# Set a value for branch
@editorialbot set joss-paper as branch

# Run checks and provide information on the repository and the paper file
@editorialbot check repository

# Check the references of the paper for missing DOIs
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@editorialbot generate pdf

# Generates a LaTeX preprint file
@editorialbot generate preprint

# Get a link to the complete list of reviewers
@editorialbot list reviewers

[robbibt]

@editorialbot check references

[editorialbot]

Reference check summary (note 'MISSING' DOIs are suggestions that need verification):

✅ OK DOIs

- 10.5281/zenodo.5555395 is OK
- 10.5281/zenodo.3509134 is OK
- 10.25080/Majora-92bf1922-00a is OK
- 10.5334/jors.148 is OK
- 10.3390/rs4113417 is OK
- 10.1016/j.rse.2017.04.009 is OK
- 10.1002/gdj3.174 is OK
- 10.26186/145234 is OK
- 10.26186/149403 is OK
- 10.21105/joss.06683 is OK
- 10.1016/j.rse.2013.12.019 is OK
- 10.1016/j.rse.2021.112734 is OK
- 10.1016/j.ecss.2019.03.006 is OK
- 10.3390/rs10030480 is OK
- 10.1017/cft.2022.4 is OK
- 10.1016/j.coastaleng.2021.103919 is OK
- 10.1016/j.envsoft.2019.104528 is OK
- 10.2139/ssrn.4858713 is OK

🟡 SKIP DOIs

- No DOI given, and none found for title: opendatacube/odc-geo
- No DOI given, and none found for title: A new barotropic tide model for global ocean: FES2...
- No DOI given, and none found for title: SpatioTemporal Asset Catalog (STAC) specification

❌ MISSING DOIs

- None

❌ INVALID DOIs

- None

[robbibt]

Thanks @kthyng, I'll work on this now.

[robbibt]

@editorialbot check repository

[editorialbot]

Software report:

github.com/AlDanial/cloc v 1.98  T=0.07 s (623.9 files/s, 318028.2 lines/s)
-------------------------------------------------------------------------------
Language                     files          blank        comment           code
-------------------------------------------------------------------------------
CSV                              2              0              0           8789
Python                          12            577           1522           2280
Jupyter Notebook                 7              0           6981           1318
Markdown                        12            354              3            676
YAML                             7             48             37            344
TeX                              1             20              0            209
TOML                             1             13              0            119
make                             1             16              8             81
CSS                              1              3              3             20
Dockerfile                       1              6              6              9
INI                              1              1              0              4
-------------------------------------------------------------------------------
SUM:                            46           1038           8560          13849
-------------------------------------------------------------------------------

Commit count by author:

   263	Robbi Bishop-Taylor
     1	ClaireP

[editorialbot]

Paper file info:

⚠️ Wordcount for paper.md is 1584

✅ The paper includes a Statement of need section

[editorialbot]

License info:

✅ License found: Apache License 2.0 (Valid open source OSI approved license)

[robbibt]

@editorialbot check repository

[editorialbot]

Software report:

github.com/AlDanial/cloc v 1.98  T=0.07 s (620.4 files/s, 316237.0 lines/s)
-------------------------------------------------------------------------------
Language                     files          blank        comment           code
-------------------------------------------------------------------------------
CSV                              2              0              0           8789
Python                          12            577           1522           2280
Jupyter Notebook                 7              0           6981           1318
Markdown                        12            355              3            677
YAML                             7             48             37            344
TeX                              1             20              0            209
TOML                             1             13              0            119
make                             1             16              8             81
CSS                              1              3              3             20
Dockerfile                       1              6              6              9
INI                              1              1              0              4
-------------------------------------------------------------------------------
SUM:                            46           1039           8560          13850
-------------------------------------------------------------------------------

Commit count by author:

   264	Robbi Bishop-Taylor
     1	ClaireP

[editorialbot]

Paper file info:

⚠️ Wordcount for paper.md is 1519

✅ The paper includes a Statement of need section

[editorialbot]

License info:

✅ License found: Apache License 2.0 (Valid open source OSI approved license)

[robbibt]

@editorialbot check repository

[editorialbot]

Software report:

github.com/AlDanial/cloc v 1.98  T=0.07 s (615.0 files/s, 313527.2 lines/s)
-------------------------------------------------------------------------------
Language                     files          blank        comment           code
-------------------------------------------------------------------------------
CSV                              2              0              0           8789
Python                          12            577           1522           2280
Jupyter Notebook                 7              0           6981           1318
Markdown                        12            355              3            677
YAML                             7             48             37            344
TeX                              1             20              0            209
TOML                             1             13              0            119
make                             1             16              8             81
CSS                              1              3              3             20
Dockerfile                       1              6              6              9
INI                              1              1              0              4
-------------------------------------------------------------------------------
SUM:                            46           1039           8560          13850
-------------------------------------------------------------------------------

Commit count by author:

   265	Robbi Bishop-Taylor
     1	ClaireP

[editorialbot]

Paper file info:

⚠️ Wordcount for paper.md is 1480

✅ The paper includes a Statement of need section

[editorialbot]

License info:

✅ License found: Apache License 2.0 (Valid open source OSI approved license)

[robbibt]

Hi @kthyng, I've been able to significantly reduce the length of the paper by approximately half: from 2625 to 1480 words.

Would this be acceptable to move forward? I've made sure that the "summary" and "statement of need" are within the requested limit. The remainder is a brief snapshot of the key features of the package - I'd really love to keep this in the paper if at all possible so we can reference it in future papers.

Here are some suggestions for reviewers with expertise in coastal Python package development:

• Kilian Vos (kvos), author CoastSat Python package
• Sharon Fitzpatrick (2320sharon), author CoastSeg Python package
• Floris Calkoen (FlorisCalkoen), author coastpy Python package
• Freya Muir (fmemuir), author vegsat Python package
• Nicholas Pucino (npucino), author sandpyper Python package