From a1ef8c8b649ef2416206a5842b1f4a365f90ff32 Mon Sep 17 00:00:00 2001 From: Will Moore Date: Tue, 8 Oct 2024 14:37:46 +0100 Subject: [PATCH] Add 2024-10-08 --- 2024/2024-10-08.md | 57 ++++++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 57 insertions(+) create mode 100644 2024/2024-10-08.md diff --git a/2024/2024-10-08.md b/2024/2024-10-08.md new file mode 100644 index 0000000..935c868 --- /dev/null +++ b/2024/2024-10-08.md @@ -0,0 +1,57 @@ +--- +tags: Tuesday +--- + +# 2024-10-08 + +Attending: Will, Josh, Petr, Dom, Kyle, Tom, Khaled, Seb, Frances, Chris, David S, Melissa, + +Start: 2:00 pm UK + +## Accepting minutes from [last meeting](https://hackmd.io/team/ome?nav=overview) + +## Project Status + +(2-3 minutes each) + +- IDR Frances: idr0158 released today. Multiplexed immuno study. 40 antibodies. New mapr config for antibodies. +- Meeting on IDR search on Thursday morning. e.g migrate away from mapr. Small steps starting ASAP. +- NGFF challenge. Samples viewer (work in progress) to show converted zarr v3 data. + +- OMERO + +- Bio-Formats: Melissa: on track for BF 8.0.0 release week of 21st. + +- NGFF + - Josh: Challenge: + - https://ome.github.io/ome2024-ngff-challenge/ now live + - Few sites dribbling in (Crick, Jülich, Göttingen) + - RFCs + - https://ngff.openmicroscopy.org/rfc/5 published + - RFC-3 still needs work + - Reviewers to contact + +- GerBI: + - Tom: OMERO IT Workshop in Heidelberg next week. 22 participants from 11 institutions: core facility + IT together. :handshake: + - Petr: How? What will you concretely set up and how ? + - Tom: first day discuss & get them to interact with each other, same language. second day is more practical on VMs (provided by IT themselves) to run ansible playbooks, explain /Files, etc. + - [FAIRDOM](https://fairdomhub.org/) presentation last week at AIMM/BINA. YouTube link to come... + - BioMedical meeting in Heidelberg (Nov): https://indico.dkfz.de/e/nfdi-biomed ("metadata") + - Spatial data meeting in Berlin (Dec): https://indico.dkfz.de/event/1112/ + - Continued work on [OMERO-vitessce integration](https://github.com/NFDI4BIOIMAGE/omero-vitessce?tab=readme-ov-file#development) + - Registry of OMEROs? + +- Glencoe: Chris: + - Elrig Drug discovery London [Meeting last week](https://elrig.org/portfolio/drug-discovery-2024/) (David) + - SPI2 were running one of the 4 tracks. Not a lot of imaging in general but presentation well received. + +- Community + - Japan: workshops 4th & 6th November. + +## AOB + +(5 min. max; tech. Discussion should be highlighted to relevant people and rescheduled) + +## Main Topic + +(20-25 minutes plus 15 minutes questions max)