From 4689636b9bb9952968f32ae3b43e8a531d565455 Mon Sep 17 00:00:00 2001 From: HackMD Date: Tue, 9 Aug 2022 13:40:15 +0000 Subject: [PATCH] Add minutes for 2022-08-09 meeting --- 2022/2022-08-09.md | 63 ++++++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 63 insertions(+) create mode 100644 2022/2022-08-09.md diff --git a/2022/2022-08-09.md b/2022/2022-08-09.md new file mode 100644 index 0000000..728b841 --- /dev/null +++ b/2022/2022-08-09.md @@ -0,0 +1,63 @@ +--- +tags: Tuesday +--- + +# 2022-08-09 + +Attending: Jason, June, Will, Petr, Josh, Tom, Seb, Frances, Wilma, Andreas, Kyle, David G., Melissa, Emil, Mina, Muhanad, Erin, Kevin + +Start: 2:00 pm UK + +## Accepting minutes from [last meeting](https://github.com/ome/meeting-minutes) + +## Project Status + +(2-3 minutes each) + +- IDR (Frances): + - lots of testing new datasets & formats. + - next release: idr0134 plant study ontology mapping + - Seb: storage space still an issue + - investigating new storage, performance issues + - several new submissions are in OME-NGFF format which may offer a solution in future - we don't host the data but "import" from remote + - Jason: could move less critical datasets to free-up space + - Josh: for more-frequently accessed data, cache will help performance + +- OMERO: + - OMERO.figure release soon (this week) + +- Bio-Formats: + - 6.10.1 patch release on Thursday + +- NGFF (Josh) + - FYI: ZEP2 (Sharding): https://zarr.dev/zeps/draft_zeps/ + - Java/Zarr chat (Aug. 2) summary + - 5ish choices: jzarr, n5, netcdf-java, fork, new + - next steps: code to show example questions + - other levels of the same problem (codecs, s3-libraries, array libraries, "high-level" apis) + - Seb: matrix of libs and maintainers, pros / cons? + +- Glencoe: + - "NGFF Converter" UI tool release coming. + - All open-source. Builds will be signed etc. + - Seb: useful for IDR submitters too. + - NGFF import performance investigations, good to compare OMERO and OMERO plus. + +- GerBI: + - Tom: UI tool for using neural-net with OMERO + +- Community + - Holidays and Support + - image.sc etc: OK to say "lots of team away - we'll get back to you" + - OME meeting - vision document nearly ready... + - Virtual meeting + - NIH virtual workshop in September to highlight importance of imaging data + - Josh: Volume EM community interested in moving to OME-NGFF + +## AOB + +(5 min. max; tech. Discussion should be highlighted to relevant people and rescheduled) + +## Main Topic + +(20-25 minutes plus 15 minutes questions max)