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DOC: 24.0.0 changelog
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24.0.0 (June 17, 2024)
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======================
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New feature release in the 24.0.x series.
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This release is an incremental improvement on 23.2.x, with some
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fixes for bugs discovered in the updated workflow.
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New features include separation of HTML reports by session for subjects
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with many BOLD runs, a new ``--fs-no-resume`` option to improve interoperability
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with less typical FreeSurfer directories, such as those generated by longitudinal
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FreeSurfer or FastSurfer, and adoption of DatasetLinks and BIDS-URIs, to follow
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the recommendations of recent versions of BIDS.
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With thanks to Dimitri Papadopoulos, Basile Pinsard, Celine Provins, Taylor Salo
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and Wang Hao-Ting for their contributions!
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* FIX: Add "double" type to allowed DisplacementFieldTransform (#3287)
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* FIX: Require recent templateflow, select correct aparc dseg.tsv (#3256)
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* FIX: Ensure proper templates are retrieved with sloppy (#3251)
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* FIX: Delete summary from functional report when separated by sessions (#3223)
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* FIX: Support lists in bids filter file containing ``null`` or ``*`` (#3215)
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* FIX: Re-enable anat fasttrack for dataset without t1w (#3202)
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* ENH: Use BIDSURI in init_ds_boldmask_wf (#3297)
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* ENH: Add templateflow to DatasetLinks (#3267)
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* ENH: Track proximal sources of functional GIFTIs (#3263)
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* ENH: Support named derivative paths (#3264)
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* ENH: Track Sources for standard-space outputs (#3262)
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* ENH: Add --fs-no-resume option to reuse existing FreeSurfer outputs without resuming (#3142)
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* ENH: Use BIDS URIs to track Sources in sidecars (#3255)
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* ENH: Ignore unselected subjects in BIDSLayoutIndexer (#3236)
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* ENH: Add metadata for motion parameters (#3245)
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* ENH: Separate anatomical and functional reports per session for densely sampled dataset (#3191)
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* ENH: Leverage T2w if available for BOLD -> anat coregistration (#3208)
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* RF: Fix ITK warp conversion to nitransforms format (#3300)
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* RF: Load report assembler from nireports (#3177)
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* DOC: Clarify ``--dvars-spike-threshold`` uses standardized DVARS (#3205)
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* TST: Update test to reflect new report generation behavior (#3210)
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* STY: Manual conversions to f-strings (#3241)
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* STY: Apply ruff/pyupgrade rule UP031 (#3280)
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* STY: Lint and style check full repository (#3221)
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* STY: Adopt ruff for linting and formatting (#3206)
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* MNT: Pin libitk 5.3 and note dependencies (#3298)
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* MNT: Upgrade ruff pre-commit, add fixing checks (#3283)
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* MNT: Complete transition from flake8/black to ruff (#3279)
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* MNT: Apply Repo-Review suggestions (#3194)
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* MNT: Verbatim copy of Apache license 2.0 (#3259)
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* MNT: Bump cryptography from 41.0.7 to 42.0.4 (#3234)
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* MNT: Drop copyright year, unused dunder fields (#3247)
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* MNT: Update environment pins (#3226)
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* MNT: Bump codecov/codecov-action from 3 to 4 (#3219)
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* DOCKER: Restore mincinfo binary (#3249)
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* CI: Move to new circle machine tags (#3248)
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* CI: Avoid ruff warning (#3244)
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* CI: Pass ruff tests (#3243)
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23.2.3 (May 20, 2024)
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=====================
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Bug fix release in the 23.2.x series.

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