_workflowr.yml

# workflowr options
# Version 1.6.1

# The seed to use for random number generation. See ?set.seed for details.
seed: 20200420
# The working directory to build the R Markdown files. The path is relative to
# _workflowr.yml. See ?rmarkdown::render for details.
knit_root_dir: "."

name: "IRE Analyses"
navbar:
  title: "IRE Analyses"
  left:
    - text: "Home"
      href: index.html
    - text: "About"
      href: about.html
    - text: "Defining IRE Genesets"
      menu:
        - text: "Human"
        - href: index.html
        - text: "Mouse"
        - href: index.html
        - text: "Zebrafish"
        - href: index.html
    - text: "Datasets"
      menu:
        - text: "fAD-like zebrafish"
        - text: "Pre-processing"
        - href: index.html
        - text: "Import into R"
        - href: index.html
        - text: "DE Analysis"
        - href: index.html
        - text: "------------------"
        - text: "Mayo Clinic RNA-seq"
        - text: "Import into R"
        - href: index.html
        - text: "DE Analysis"
        - href: index.html
        - text: "------------------"
        - text: "Caco-2 cell line"
        - text: "Import into R"
        - href: index.html
        - text: "DE Analysis"
        - href: index.html
        - text: "------------------"
        - text: "5XFAD mouse"
        - text: "Import into R"
        - href: index.html
        - text: "DE Analysis"
        - href: index.html
        - text: "------------------"
        - text: "non fAD-like zebrafish"
        - text: "Import into R"
        - href: index.html
        - text: "DE Analysis"
        - href: index.html
    - text: "Gene Set Testing"
      menu:
        - text: "Caco-2 cell line"
        - href: index.html
        - text: "Mayo Clinic RNA-seq"
        - href: index.html
        - text: "5XFAD mouse"
        - href: index.html
        - text: "fAD-like zebrafish"
        - href: index.html
        - text: "non fAD-like zebrafish"
        - href: index.html
    - text: "Transcript Stability"