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Language server correct of arriba module #576

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rannick opened this issue Dec 6, 2024 · 0 comments
Open

Language server correct of arriba module #576

rannick opened this issue Dec 6, 2024 · 0 comments
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rannick commented Dec 6, 2024

Description of the bug

    def args = task.ext.args ?: ''
    def prefix = task.ext.prefix ?: "${meta.id}"
    def arg_blacklist = blacklist ? "-b $blacklist" : "-f blacklist"
    def arg_known_fusions = known_fusions ? "-k $known_fusions" : ""
    def arg_cytobands = cytobands ? "-d $cytobands" : ""
    def arg_protein_domains = protein_domains ? "-p $protein_domains" : ""

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@rannick rannick added the bug Something isn't working label Dec 6, 2024
@rannick rannick self-assigned this Dec 6, 2024
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