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For --outdir I included a trailing forward slash in the gs:// path, which resulted in Failed to publish file: warnings.
--outdir
gs://
Failed to publish file:
It appears that the pipeline is concatenating strings versus using file(params.outdir) / "path/to/output".
file(params.outdir) / "path/to/output"
`--outdir gs://path/to/output/` instead of `--outdir gs://path/to/output`
No response
The text was updated successfully, but these errors were encountered:
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Description of the bug
For
--outdirI included a trailing forward slash in thegs://path, which resulted inFailed to publish file:warnings.It appears that the pipeline is concatenating strings versus using
file(params.outdir) / "path/to/output".Command used and terminal output
`--outdir gs://path/to/output/` instead of `--outdir gs://path/to/output`Relevant files
No response
System information
The text was updated successfully, but these errors were encountered: