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<!DOCTYPE html>
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<head>
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<meta name="keywords" content="Neurokernel, Drosophila, brain emulation, computational neuroscience" />
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<title>Neurokernel</title>
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<h1>Neurokernel</h1>
<p>An open source platform for emulating the fruit fly brain</p>
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<h1>Modeling the fly brain</h1>
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<h1>Developed in Python and CUDA</h1>
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allowtransparency="true" frameborder="0" scrolling="0"
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<h1>What Is It?</h1>
<p>The Neurokernel Project aims to build an open software platform for
the emulation of the entire brain of the fruit fly <i>Drosophila melanogaster</i> on
multiple Graphics Processing Units (GPUs).</p>
<h1>Spotlights!</h1>
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<img style="center:auto"
src="img/ffbh2019_flyer.png"/></a>
<p>Fruit Fly Brain Hackathon 2019 will be held at Columbia
University on March 20, 2019. Please see the
<a href="event.html">Event</a> page for more details.</p>
</div>
<div class="item news">
<img style="center:auto"
src="img/osp.png"/></a>
<p>The Fruit Fly Brain Observatory, a sister project of
Neurokernel, won the phase I competition of the
<a href="https://www.openscienceprize.org/">Open Science Prize</a>. Please see the
<a href="http://fruitflybrain.org">FFBO</a> page for more details.</p>
</div>
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<img style="center:auto"
src="img/brain.png"/></a>
<p>The
<a href="http://fruitflybrain.org">Fruit Fly Brain Observatory</a>,
a sister project of Neurokernel, is now online!</p>
</div>
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src="https://www.youtube.com/embed/KL5dkkUBuWU?rel=0"
allowfullscreen frameborder="0">
</iframe>
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<p>A short video highlights the architecture of the Neurokernel.</p>
</div>
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src="https://www.youtube.com/embed/3hPsmZXpylM?rel=0"
allowfullscreen frameborder="0"></iframe>
<div class="video_mask"></div>
<p>A visual evaluation of the <i>Drosophila melanogaster</i>
retina as a parallel information pre-processor. Details of
the above video are described in the Neurokernel
<a href="http://neurokernel.github.io/docs.html">RFC</a>,
<a href="http://neurokernel.github.io/rfc/nk-rfc3.pdf">"Neurokernel: An Open Source Platform for Emulating the Fruit Fly Brain"</a>.</p>
</div>
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src="img/ft-peng.jpeg"/></a>
<p>The Neurokernel project was featured by <a href="http://www.ft.com/">Financial Times</a>
in an article entitled
<a href="http://www.ft.com/cms/s/0/e761733c-987d-11e5-95c7-d47aa298f769.html">Neurobiology: what fly brains can teach us</a>.
<br><small>(Photograph: Hanchuan Peng and HHMI, Janelia Research Campus, USA)</small></p>
</div>
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<img style="center:auto"
src="img/CNS2105_WS.png"/></a>
<p>The Neurokernel project was presented in the workshop,
<a href="http://www.opensourcebrain.org/docs/help/meetings#cns_2015/">open collaboration in computational neuroscience</a>,
at <a href="http://www.cnsorg.org/cns-2015-workshops-program/">computational neuroscience meeting 2015</a>.</p>
</div>
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src="https://www.youtube.com/embed/fwQx1OUltx4?rel=0"
allowfullscreen frameborder="0"></iframe>
<div class="video_mask"></div>
<p>To get a better idea about Neurokernel, check out the following presentation
given by <a href="http://www.ee.columbia.edu/~aurel/">Aurel A. Lazar</a>
at <a href="http://www.neuroinformatics2014.org/">NeuroInformatics 2014</a>.</p>
</div>
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</div>
<div class="col-md-6">
<h1>How Can I Try It?</h1>
<p>Interested? Great!</p>
<ul class="list-group">
<li class="list-group-item">Clone the source from
<a href="https://github.com/neurokernel/neurokernel">GitHub</a>.</li>
<li class="list-group-item">Check out the project <a
href="http://neurokernel.rtfd.io">documentation</a> and
<a href="https://github.com/neurokernel/neurokernel/wiki">Wiki</a>.</li>
<li class="list-group-item">Take a look at the
<a href="http://neurokernel.github.io/docs">demos</a>.</li>
</ul>
<p>Got a question or encountered problems?</p>
<ul class="list-group">
<li class="list-group-item">Start a discussion on the project
<a href="http://neurokernel.67426.x6.nabble.com">forum</a> or
<a href="https://listserv.cuit.columbia.edu/scripts/wa.exe?A0=NEUROKERNEL-DEV">mailing
list</a>.</li>
<li class="list-group-item">Send in bug reports to the project
<a href="http://github.com/neurokernel/neurokernel/issues">issue tracker</a>.</li>
</ul>
<p>Have a new feature to propose and add?</p>
<ul class="list-group">
<li class="list-group-item">Propose a new <a href="./docs.html">RFC</a> on the project forum
or mailing list.</li>
<li class="list-group-item">Send in code via a <a href="http://github.com/neurokernel/neurokernel/pulls">pull
request</a>.</li>
</ul>
</div>
</div><!-- container -->
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<p><a href="https://creativecommons.org/licenses/by/3.0/us/"><img src="img/by.svg" style="position:relative;" width=70px/></a> <a href="people.html#nk_web_team">Neurokernel Web Team</a></p>
<p>Designed by <a href="http://lebedov.github.io">Lev Givon</a>
<p>Maintained by <a href="mailto:[email protected]">C.-H. Yeh</a></p>
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