Unable to build the code

[saikumar-neelam]

Hi,

We are unable to build the code using below commands.

CGO_ENABLED=1 CGO_LDFLAGS="-L/root/go-workspace/ducklib/" go build -tags=duckdb_use_lib main.go

The above command execution is throwing continous errors and warnings. Below is the errors throwing while building the code.

/root/go-workspace/ducklib//libduckdb.so: undefined reference to std::__cxx11::basic_stringbuf<char, std::char_traits<char>, std::allocator<char> >::str() const@GLIBCXX_3.4.21' collect2: error: ld returned 1 exit status github.com/marcboeker/go-duckdb duckdb.cpp:121831:10: warning: missing terminating " character [enabled by default] return R"( ^

Appreciate for response.

[github-actions]

Thanks for opening an Issue! Please star this repository to motivate developers! ⭐

[lmangani]

Hello @saikumar-neelam and thanks for giving this a try!

You can see our workind builder here. Note go-duckdb library quackpipe uses ships with its own bindings to specific duckdb releases so you dont need to link your own.

[saikumar-neelam]

Thank You @lmangani for your response.

Tried building image with the provided builder, still error persists.

 ERROR [builder 3/5] RUN CGO_ENABLED=1 go build -o quackpipe quackpipe.go                                                       0.7s
[builder 3/5] RUN CGO_ENABLED=1 go build -o quackpipe quackpipe.go:
0 0.623 quackpipe.go:18:2: no required module provides package github.com/marcboeker/go-duckdb: go.mod file not found in current directory or any parent directory; see 'go help modules'
Dockerfile:4

   2 |     WORKDIR /
   3 |     COPY . .
   4 | >>> RUN CGO_ENABLED=1 go build -o quackpipe quackpipe.go
   5 |     RUN strip quackpipe
   6 |       

ERROR: failed to solve: process "/bin/sh -c CGO_ENABLED=1 go build -o quackpipe quackpipe.go" did not complete successfully: exit code: 1

Thank You
Sai Kumar N.

[lmangani]

Did you run go mod tidy or go mod download from the project folder to fetch dependencies?

CGO_ENABLED=1 go build -o quackpipe -buildvcs=false 

[saikumar-neelam]

Hi @lmangani

Please find below error logs.

duckdb.cpp:(.text+0x48246f): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_append(char const*, unsigned long)'
duckdb.cpp:(.text+0x48249c): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_append(char const*, unsigned long)'
duckdb.cpp:(.text+0x4824e6): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_append(char const*, unsigned long)'
/root/go/pkg/mod/github.com/marcboeker/[email protected]/deps/linux_amd64/libduckdb.a(duckdb.o):duckdb.cpp:(.text+0x4824f6): more undefined references to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_append(char const*, unsigned long)' follow
/root/go/pkg/mod/github.com/marcboeker/[email protected]/deps/linux_amd64/libduckdb.a(duckdb.o): In function `duckdb::Binder::RetrieveUsingBinding(duckdb::Binder&, duckdb::UsingColumnSet*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, duckdb::UsingColumnSet*)':
duckdb.cpp:(.text+0x48271b): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_assign(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
/root/go/pkg/mod/github.com/marcboeker/[email protected]/deps/linux_amd64/libduckdb.a(duckdb.o): In function `duckdb::ArrowUtil::TryFetchChunk(duckdb::QueryResult*, unsigned long, ArrowArray*, unsigned long&, duckdb::PreservedError&)':
duckdb.cpp:(.text+0x483a53): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_assign(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
duckdb.cpp:(.text+0x483a68): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_assign(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
/root/go/pkg/mod/github.com/marcboeker/[email protected]/deps/linux_amd64/libduckdb.a(duckdb.o): In function `duckdb::ResultArrowArrayStreamWrapper::MyStreamGetNext(ArrowArrayStream*, ArrowArray*)':
duckdb.cpp:(.text+0x483c28): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_assign(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
duckdb.cpp:(.text+0x483c36): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_assign(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
/root/go/pkg/mod/github.com/marcboeker/[email protected]/deps/linux_amd64/libduckdb.a(duckdb.o):duckdb.cpp:(.text+0x483d5d): more undefined references to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_assign(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)' follow
/root/go/pkg/mod/github.com/marcboeker/[email protected]/deps/linux_amd64/libduckdb.a(duckdb.o): In function `duckdb::Transformer::TransformImport(duckdb_libpgquery::PGNode*)':
duckdb.cpp:(.text+0x4876e9): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_replace(unsigned long, unsigned long, char const*, unsigned long)'
/root/go/pkg/mod/github.com/marcboeker/[email protected]/deps/linux_amd64/libduckdb.a(duckdb.o): In function `duckdb::ReadCSVReplacement(duckdb::ClientContext&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, duckdb::ReplacementScanData*)':
duckdb.cpp:(.text+0x487a46): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::find(char const*, unsigned long, unsigned long) const'
duckdb.cpp:(.text+0x487b1e): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::operator=(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&&)'
duckdb.cpp:(.text+0x487ccc): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::substr(unsigned long, unsigned long) const'
duckdb.cpp:(.text+0x487cd7): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::operator=(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&&)'
duckdb.cpp:(.text+0x487d90): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::find(char const*, unsigned long, unsigned long) const'
/root/go/pkg/mod/github.com/marcboeker/[email protected]/deps/linux_amd64/libduckdb.a(duckdb.o): In function `duckdb::DisabledOptimizersSetting::GetSetting(duckdb::ClientContext&)':
duckdb.cpp:(.text+0x4880a6): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_append(char const*, unsigned long)'
duckdb.cpp:(.text+0x4880ed): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_append(char const*, unsigned long)'
/root/go/pkg/mod/github.com/marcboeker/[email protected]/deps/linux_amd64/libduckdb.a(duckdb.o): In function `duckdb::Transformer::TransformUse(duckdb_libpgquery::PGNode*)':
duckdb.cpp:(.text+0x48884e): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_assign(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
duckdb.cpp:(.text+0x488930): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_append(char const*, unsigned long)'
/root/go/pkg/mod/github.com/marcboeker/[email protected]/deps/linux_amd64/libduckdb.a(duckdb.o): In function `duckdb::ExpressionBinder::CreateStructExtract(std::unique_ptr<duckdb::ParsedExpression, std::default_delete<duckdb::ParsedExpression> >, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >)':
duckdb.cpp:(.text+0x488cd3): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::find(char const*, unsigned long, unsigned long) const'
/root/go/pkg/mod/github.com/marcboeker/[email protected]/deps/linux_amd64/libduckdb.a(duckdb.o): In function `duckdb::ExpressionBinder::QualifyColumnNames(std::unique_ptr<duckdb::ParsedExpression, std::default_delete<duckdb::ParsedExpression> >&)':
duckdb.cpp:(.text+0x489649): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_assign(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
duckdb.cpp:(.text+0x489688): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_assign(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
/root/go/pkg/mod/github.com/marcboeker/[email protected]/deps/linux_amd64/libduckdb.a(duckdb.o): In function `duckdb::ExpressionBinder::BindQualifiedColumnName(duckdb::ColumnRefExpression&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)':
duckdb.cpp:(.text+0x48994b): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_create(unsigned long&, unsigned long)'
/root/go/pkg/mod/github.com/marcboeker/[email protected]/deps/linux_amd64/libduckdb.a(duckdb.o): In function `duckdb::Transformer::TransformShow(duckdb_libpgquery::PGNode*)':
duckdb.cpp:(.text+0x489d40): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_assign(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
duckdb.cpp:(.text+0x489d59): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_assign(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
duckdb.cpp:(.text+0x489e5e): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::compare(char const*) const'
duckdb.cpp:(.text+0x489e71): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::assign(char const*)'
duckdb.cpp:(.text+0x489ebb): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::compare(char const*) const'
duckdb.cpp:(.text+0x489ece): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::compare(char const*) const'
duckdb.cpp:(.text+0x489ee1): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::assign(char const*)'
duckdb.cpp:(.text+0x489efb): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::assign(char const*)'
duckdb.cpp:(.text+0x489f13): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::assign(char const*)'
/root/go/pkg/mod/github.com/marcboeker/[email protected]/deps/linux_amd64/libduckdb.a(duckdb.o): In function `duckdb::DefaultTypeGenerator::CreateDefaultEntry(duckdb::ClientContext&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)':
duckdb.cpp:(.text+0x48a711): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::compare(char const*) const'
duckdb.cpp:(.text+0x48a798): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::compare(char const*) const'
duckdb.cpp:(.text+0x48a977): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_assign(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
/root/go/pkg/mod/github.com/marcboeker/[email protected]/deps/linux_amd64/libduckdb.a(duckdb.o): In function `duckdb::VectorStringToList::StringToNestedTypeCastLoop(duckdb::string_t*, duckdb::ValidityMask&, duckdb::Vector&, duckdb::ValidityMask&, unsigned long, duckdb::CastParameters&, duckdb::SelectionVector const*)':
duckdb.cpp:(.text+0x49f6fd): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_replace(unsigned long, unsigned long, char const*, unsigned long)'
duckdb.cpp:(.text+0x49f789): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_append(char const*, unsigned long)'
duckdb.cpp:(.text+0x49fa77): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_assign(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
/root/go/pkg/mod/github.com/marcboeker/[email protected]/deps/linux_amd64/libduckdb.a(duckdb.o): In function `duckdb::Base64Fun::RegisterFunction(duckdb::BuiltinFunctions&)':
duckdb.cpp:(.text+0x4a1c14): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_create(unsigned long&, unsigned long)'
duckdb.cpp:(.text+0x4a1c53): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_create(unsigned long&, unsigned long)'
/root/go/pkg/mod/github.com/marcboeker/[email protected]/deps/linux_amd64/libduckdb.a(duckdb.o): In function `duckdb::CurrentDateFun::RegisterFunction(duckdb::BuiltinFunctions&)':
duckdb.cpp:(.text+0x4a2b92): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_create(unsigned long&, unsigned long)'
duckdb.cpp:(.text+0x4a2bd1): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_create(unsigned long&, unsigned long)'
/root/go/pkg/mod/github.com/marcboeker/[email protected]/deps/linux_amd64/libduckdb.a(duckdb.o): In function `duckdb::CurrentTimestampFun::RegisterFunction(duckdb::BuiltinFunctions&)':
duckdb.cpp:(.text+0x4a30ea): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_create(unsigned long&, unsigned long)'

[lmangani]

@saikumar-neelam That's odd. What OS/version and go version are you attempting this with?
As you can see the action builds and runs fine so this must be related to your setup.

[saikumar-neelam]

@lmangani : I am using CentOS Linux release 7.9.2009 (Core) and go version go1.20.4 linux/amd64

[lmangani]

Perhaps you can try running a test with //github.com/marcboeker/go-duckdb directly and see if it poses the same challenge? Happy to implement any required fixes to make this as accessible as possible.