Merge pull request #140 from mdsol/fix/deployment_fix_runs_on

Add missing FormData attributes

Author: glow-mdsol

.github/workflows/publish.yml

@@ -7,6 +7,8 @@ on:
 jobs:
   test-publish:
     name: Test Publish
+    runs-on:
+      ubuntu-latest
     strategy:
       fail-fast: false
       matrix:
@@ -32,6 +34,8 @@ jobs:
   publish:
     needs: test-publish
     name: Publish to PyPI
+    runs-on:
+      ubuntu-latest
     strategy:
       fail-fast: false
       matrix:

poetry.lock

@@ -30,7 +30,7 @@ requests = "*"
 six = "*"
 click = "*"
 faker = "*"
-urllib3 = "^1.26.9"
+urllib3 = "*"
 Sphinx = { version = "^5.1.1", optional = true }
 
 

pyproject.toml

@@ -225,15 +225,19 @@ class FormData(TransactionalElement, LastUpdateMixin, MilestoneMixin):
 
     ALLOWED_TRANSACTION_TYPES = ["Insert", "Update", "Upsert", "Context", "Remove"]
 
-    def __init__(self, formoid, transaction_type=None, form_repeat_key=None):
+    def __init__(self, formoid, transaction_type=None, form_repeat_key=None, lab_reference=None, lab_type=None):
         """
         :param str formoid: :class:`FormDef` OID
         :param str transaction_type: Transaction Type for Data (one of **Insert**, **Update**, **Upsert**, **Context**, **Remove**)
         :param str form_repeat_key: Repeat Key for FormData
+        :param str lab_reference: Name for the Lab with the ranges
+        :param LabType lab_type: Type of the Lab (Central, Local)
         """
         super(FormData, self).__init__(transaction_type)
         self.formoid = formoid
         self.form_repeat_key = form_repeat_key
+        self.lab_reference = lab_reference
+        self.lab_type = lab_type
         self.itemgroups = []
         #: :class:`Signature` for FormData
         self.signature = None  # type: Signature
@@ -254,6 +258,12 @@ def build(self, builder):
         if self.form_repeat_key is not None:
             params["FormRepeatKey"] = str(self.form_repeat_key)
 
+        if self.lab_reference is not None:
+            params["mdsol:LaboratoryRef"] = str(self.lab_reference)
+
+        if self.lab_type is not None:
+            params["mdsol:LaboratoryType"] = self.lab_type.value
+
         # mixins
         self.mixin()
         self.mixin_params(params)

rwslib/builders/clinicaldata.py

@@ -297,6 +297,15 @@ class LocationType(enum.Enum):
     Other = 'Other'
 
 
+class LabType(enum.Enum):
+    """
+    Type of LaboratoryType
+    Applies to a :class:`FormData`
+    """
+    Local = 'Local'
+    Central = 'Central'
+
+
 class UserType(enum.Enum):
     """
     User Type Enumeration

rwslib/builders/constants.py

@@ -422,6 +422,11 @@ def test_add_signature(self):
         self.assertEqual(self.__class__.__name__[4:], t.tag)
         self.assertTrue(len(list(t)) == 4)  # three igdata + 1 signature
 
+    def test_lab_settings(self):
+        tested = FormData("TESTFORM_A", lab_reference="A Lab", lab_type=LabType.Local)
+        doc = obj_to_doc(tested)
+        self.assertEqual(doc.attrib["mdsol:LaboratoryRef"], "A Lab")
+        self.assertEqual(doc.attrib["mdsol:LaboratoryType"], "Local")
 
 class TestItemGroupData(unittest.TestCase):
     """Test ItemGroupData classes"""