Add -e flag to pip install of mvesuvio

Author: GuiMacielPereira

.github/workflows/ci_tests_nightly.yml

@@ -26,27 +26,21 @@ jobs:
           auto-activate-base: false
 
       - name: Install mvesuvio package
-        run: pip install .
-
-      - name: Install coverage
-        run: pip install coverage[toml]
+        # The editable flag is necessary for coverage to find the src/ files
+        run: pip install -e .
 
       # Runs Unit tests
       - name: Run mvesuvio analysis unit tests
         run: |
-          coverage run --debug=trace -m unittest discover -s ./tests/unit
+          coverage run -m unittest discover -s ./tests/unit
           coverage report
 
-      - name: Coverage version
+      # Send coverage report to Coveralls
+      - name: Send coverage report to Coveralls
+        env:
+          COVERALLS_REPO_TOKEN : ${{ secrets.COVERALLS_REPO_TOKEN }}
         run: |
-          coverage --version
-
-      # # Send coverage report to Coveralls
-      # - name: Send coverage report to Coveralls
-      #   env:
-      #     COVERALLS_REPO_TOKEN : ${{ secrets.COVERALLS_REPO_TOKEN }}
-      #   run: |
-      #     coveralls --service=github-actions
+          coveralls --service=github-actions
 
       # # Runs System tests
       # - name: Run mvesuvio analysis system tests

environment.yml

@@ -9,7 +9,6 @@ dependencies:
   - flake8
   - conda-wrappers
   - pre-commit==2.15 #review this
-  # - coverage
   - coveralls
   - mantid
   - matplotlib
@@ -18,3 +17,4 @@ dependencies:
   - mock
   - pytest
   - jacobi==0.4.2 #pinned until newer versions functionality confirmed
+  - coverage