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Threshold for bounded/unbounded TFs ? #262
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Hi @matteozoia4 and thank you for using TOBIAS. I need more information to give a definitive answer for example the TOBIAS call would be a good start. I hope this answers your questions. Best wishes, |
No activity for at least 30 days. Marking issue as stale. Stale issues are closed after one week. |
Dear TOBIAS providers,
I have noticed to loose positive binding sites (after TOBIAS analysis) of TFs that we know (through ChIP-seq analysis) to be actually binding regions within our input.
-> I am working with snATAC-seq .bam files using JASPAR2024 TFBMs PWMs.
Kind regards,
MZ
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