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packages.bib
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@Manual{R-base,
title = {R: A Language and Environment for Statistical Computing},
author = {{R Core Team}},
organization = {R Foundation for Statistical Computing},
address = {Vienna, Austria},
year = {2017},
url = {https://www.R-project.org/},
}
@Manual{R-BiocStyle,
title = {BiocStyle: Standard styles for vignettes and other Bioconductor documents},
author = {Andrzej Oleś and Martin Morgan and Wolfgang Huber},
year = {2017},
note = {R package version 2.5.35},
url = {https://github.com/Bioconductor/BiocStyle},
}
@Manual{R-bookdown,
title = {bookdown: Authoring Books and Technical Documents with R Markdown},
author = {Yihui Xie},
year = {2017},
note = {R package version 0.5},
url = {https://CRAN.R-project.org/package=bookdown},
}
@Manual{R-C50,
title = {C50: C5.0 Decision Trees and Rule-Based Models},
author = {Max Kuhn and Steve Weston and Nathan Coulter and Mark Culp. C code for C5.0 by R. Quinlan},
year = {2015},
note = {R package version 0.1.0-24},
url = {https://CRAN.R-project.org/package=C50},
}
@Manual{R-caret,
title = {caret: Classification and Regression Training},
author = {Max Kuhn. Contributions from Jed Wing and Steve Weston and Andre Williams and Chris Keefer and Allan Engelhardt and Tony Cooper and Zachary Mayer and Brenton Kenkel and the R Core Team and Michael Benesty and Reynald Lescarbeau and Andrew Ziem and Luca Scrucca and Yuan Tang and Can Candan and Tyler Hunt.},
year = {2017},
note = {R package version 6.0-77},
url = {https://CRAN.R-project.org/package=caret},
}
@Manual{R-caTools,
title = {caTools: Tools: moving window statistics, GIF, Base64, ROC AUC, etc.},
author = {Jarek Tuszynski},
year = {2014},
note = {R package version 1.17.1},
url = {https://CRAN.R-project.org/package=caTools},
}
@Manual{R-class,
title = {class: Functions for Classification},
author = {Brian Ripley},
year = {2015},
note = {R package version 7.3-14},
url = {https://CRAN.R-project.org/package=class},
}
@Manual{R-dplyr,
title = {dplyr: A Grammar of Data Manipulation},
author = {Hadley Wickham and Romain Francois and Lionel Henry and Kirill Müller},
year = {2017},
note = {R package version 0.7.4},
url = {https://CRAN.R-project.org/package=dplyr},
}
@Manual{R-DT,
title = {DT: A Wrapper of the JavaScript Library 'DataTables'},
author = {Yihui Xie},
year = {2016},
note = {R package version 0.2},
url = {https://CRAN.R-project.org/package=DT},
}
@Manual{R-e1071,
title = {e1071: Misc Functions of the Department of Statistics, Probability
Theory Group (Formerly: E1071), TU Wien},
author = {David Meyer and Evgenia Dimitriadou and Kurt Hornik and Andreas Weingessel and Friedrich Leisch},
year = {2017},
note = {R package version 1.6-8},
url = {https://CRAN.R-project.org/package=e1071},
}
@Manual{R-foreach,
title = {foreach: Provides Foreach Looping Construct for R},
author = {{Revolution Analytics} and Steve Weston}},
year = {2015},
note = {R package version 1.4.3},
url = {https://CRAN.R-project.org/package=foreach},
}
@Manual{R-ggplot2,
title = {ggplot2: Create Elegant Data Visualisations Using the Grammar of Graphics},
author = {Hadley Wickham and Winston Chang},
year = {2016},
note = {R package version 2.2.1},
url = {https://CRAN.R-project.org/package=ggplot2},
}
@Manual{R-glmnet,
title = {glmnet: Lasso and Elastic-Net Regularized Generalized Linear Models},
author = {Jerome Friedman and Trevor Hastie and Noah Simon and Junyang Qian and Rob Tibshirani},
year = {2017},
note = {R package version 2.0-13},
url = {https://CRAN.R-project.org/package=glmnet},
}
@Manual{R-impute,
title = {impute: Imputation for microarray data},
author = {Trevor Hastie and Robert Tibshirani and Balasubramanian Narasimhan and Gilbert Chu},
year = {2017},
note = {R package version 1.51.0},
}
@Manual{R-kernlab,
title = {kernlab: Kernel-Based Machine Learning Lab},
author = {Alexandros Karatzoglou and Alex Smola and Kurt Hornik},
year = {2016},
note = {R package version 0.9-25},
url = {https://CRAN.R-project.org/package=kernlab},
}
@Manual{R-knitr,
title = {knitr: A General-Purpose Package for Dynamic Report Generation in R},
author = {Yihui Xie},
year = {2017},
note = {R package version 1.17},
url = {https://CRAN.R-project.org/package=knitr},
}
@Manual{R-lattice,
title = {lattice: Trellis Graphics for R},
author = {Deepayan Sarkar},
year = {2017},
note = {R package version 0.20-35},
url = {https://CRAN.R-project.org/package=lattice},
}
@Manual{R-MASS,
title = {MASS: Support Functions and Datasets for Venables and Ripley's MASS},
author = {Brian Ripley},
year = {2017},
note = {R package version 7.3-47},
url = {https://CRAN.R-project.org/package=MASS},
}
@Manual{R-Matrix,
title = {Matrix: Sparse and Dense Matrix Classes and Methods},
author = {Douglas Bates and Martin Maechler},
year = {2017},
note = {R package version 1.2-11},
url = {https://CRAN.R-project.org/package=Matrix},
}
@Manual{R-mlbench,
title = {mlbench: Machine Learning Benchmark Problems},
author = {Friedrich Leisch and Evgenia Dimitriadou.},
year = {2012},
note = {R package version 2.1-1},
url = {https://CRAN.R-project.org/package=mlbench},
}
@Manual{R-naivebayes,
title = {naivebayes: High Performance Implementation of the Naive Bayes Algorithm},
author = {Michal Majka},
year = {2017},
note = {R package version 0.9.1},
url = {https://CRAN.R-project.org/package=naivebayes},
}
@Manual{R-randomForest,
title = {randomForest: Breiman and Cutler's Random Forests for Classification and
Regression},
author = {Leo Breiman and Adele Cutler and Andy Liaw and Matthew Wiener},
year = {2015},
note = {R package version 4.6-12},
url = {https://CRAN.R-project.org/package=randomForest},
}
@Manual{R-ranger,
title = {ranger: A Fast Implementation of Random Forests},
author = {Marvin N. Wright},
year = {2017},
note = {R package version 0.8.0},
url = {https://CRAN.R-project.org/package=ranger},
}
@Manual{R-rmarkdown,
title = {rmarkdown: Dynamic Documents for R},
author = {JJ Allaire and Joe Cheng and Yihui Xie and Jonathan McPherson and Winston Chang and Jeff Allen and Hadley Wickham and Aron Atkins and Rob Hyndman and Ruben Arslan},
year = {2017},
note = {R package version 1.6},
url = {https://CRAN.R-project.org/package=rmarkdown},
}
@Manual{R-rpart,
title = {rpart: Recursive Partitioning and Regression Trees},
author = {Terry Therneau and Beth Atkinson and Brian Ripley},
year = {2017},
note = {R package version 4.1-11},
url = {https://CRAN.R-project.org/package=rpart},
}
@Manual{R-rpart.plot,
title = {rpart.plot: Plot 'rpart' Models: An Enhanced Version of 'plot.rpart'},
author = {Stephen Milborrow},
year = {2017},
note = {R package version 2.1.2},
url = {https://CRAN.R-project.org/package=rpart.plot},
}
@Manual{R-Rtsne,
title = {Rtsne: T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut Implementation},
author = {Jesse Krijthe},
note = {R package version 0.13},
url = {https://github.com/jkrijthe/Rtsne},
year = {2017},
}
@Manual{R-scales,
title = {scales: Scale Functions for Visualization},
author = {Hadley Wickham},
year = {2017},
note = {R package version 0.5.0},
url = {https://CRAN.R-project.org/package=scales},
}