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Run kleborate with a list of assemblies #98

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HilaryESR opened this issue Mar 20, 2025 · 0 comments
Open

Run kleborate with a list of assemblies #98

HilaryESR opened this issue Mar 20, 2025 · 0 comments

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@HilaryESR
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I'm trying to run Kleborate on a bunch of assemblies which are all in different archived folders. I have a text file specifying the path to each assembly. Is it possible to make Kleborate use this text file as input, instead of having to directly specify the path to the fasta files in the command?
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@HilaryESR