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+ # ###########################################################
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+ # Dockerfile to build CRISPResso
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+ # ###########################################################
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+ # Set the base image to anaconda python 2.7
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+ FROM continuumio/anaconda
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+ # File Author / Maintainer
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+ MAINTAINER Luca Pinello
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+ ENV SHELL bash
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+ RUN apt-get update && apt-get install default-jre samtools bowtie2 make gcc g++ zlib1g-dev zlib1g unzip -y
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+ RUN conda install biopython
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+ RUN wget https://github.com/lucapinello/CRISPResso/archive/master.zip
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+ RUN unzip master.zip
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+ RUN cd CRISPResso-master && python setup.py install
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+ ENV PATH /root/CRISPResso_dependencies/bin:$PATH
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+ RUN rm -Rf CRISPResso-master
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