You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Because sometimes maximum likelihood gives weird reconstructions that we wouldn't expect given our knowledge of the phenotype. Possibly useful for genotype as well.
Might be worth discussing whether to have the choice to mix and match parsimony and likelihood for phenotype and genotype reconstructions as well (e.g. parsimony for phenotype and likelihood for genotype).
The text was updated successfully, but these errors were encountered:
zenalapp
changed the title
Add option for parsimony ancestral reconstruction
Add option for maximum parsimony ancestral reconstruction
Oct 26, 2020
Example of how to do this here (might want to check other sources as well):
https://www.r-phylo.org/wiki/HowTo/Ancestral_State_Reconstruction
Because sometimes maximum likelihood gives weird reconstructions that we wouldn't expect given our knowledge of the phenotype. Possibly useful for genotype as well.
Might be worth discussing whether to have the choice to mix and match parsimony and likelihood for phenotype and genotype reconstructions as well (e.g. parsimony for phenotype and likelihood for genotype).
The text was updated successfully, but these errors were encountered: