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csc fetch-data in MacOSX arm vs. Ubuntu X86, data size is 71.35 GB vs. 1.3T? #91

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FrankieMAN-YU opened this issue Feb 2, 2025 · 3 comments
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Partipant Issue A code issue/bug encountered by challenge participant(s).

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@FrankieMAN-YU
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Beginner to join this competition, I wander where is the train_crop_manifest.csv that indicates all the labeled crops' corresponding raw fib-sem images, that is "voxel_size" "translation" "shape", etc.

And anothor questions: Is all the s0 resolution 2nm?

Sincerely waiting for your answers!

@FrankieMAN-YU
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New question, i ran command csc fetch-data both in MacOSX arm and Ubuntu X86, data size is 71.35 GB and 1.3T, why there have a big gap? What's the annoted data size?

@rhoadesScholar rhoadesScholar added the Partipant Issue A code issue/bug encountered by challenge participant(s). label Feb 6, 2025
@rhoadesScholar rhoadesScholar changed the title Where is the train_crop_manifest.csv? csc fetch-data in MacOSX arm vs. Ubuntu X86, data size is 71.35 GB vs. 1.3T? Feb 6, 2025
@rhoadesScholar
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rhoadesScholar commented Feb 6, 2025

Hi @FrankieMAN-YU! For your first two questions, I am hoping to get these Q&A type questions in the repo Discussions, so everyone will continue to easily see past questions/answers as the competition goes on. :)

As such I have answered your questions here:

That said, this data size difference seems to potentially be more of a bug, so let's keep it as an issue.

  1. Just to verify, you ran csc fetch-data with exactly the same arguments (and what were they), and same version of the repo?
  2. Have you tried running csc visualize to look at the data and visually compare what whether the same chunks/resolutions are there?

@FrankieMAN-YU
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Hi @rhoadesScholar !
For question 1: I ran exactly the same arguments csc fetch-data, and lib version remain same.
For question 2: I'm going to try this command sooner and will update it as soon as possible.

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