[pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

Author: pre-commit-ci[bot]

icepyx/__init__.py

@@ -1,5 +1,6 @@
 from _icepyx_version import version as __version__
-from icepyx.core.base_query import GenQuery, BaseQuery, LegacyQuery
+
+from icepyx.core.base_query import BaseQuery, GenQuery, LegacyQuery
 from icepyx.core.query import Query
 from icepyx.core.read import Read
 from icepyx.core.variables import Variables

icepyx/core/base_query.py

@@ -1,9 +1,8 @@
 from functools import cached_property
 import pprint
 from typing import Optional, Union, cast
-from deprecated import deprecated
-import earthaccess
 
+import earthaccess
 import geopandas as gpd
 import matplotlib.pyplot as plt
 from typing_extensions import Never
@@ -420,7 +419,6 @@ def __init__(
         auth=None,
         **kwargs,
     ):
-
         self._prod = is2ref._validate_product(product)
 
         super().__init__(spatial_extent, date_range, start_time, end_time, **kwargs)
@@ -449,9 +447,9 @@ def concept_id(self) -> Union[str, None]:
             version = self._version
         else:
             version = is2ref.latest_version(short_name)
-        collections = earthaccess.search_datasets(short_name=short_name,
-                                                  version=version,
-                                                  cloud_hosted=True)
+        collections = earthaccess.search_datasets(
+            short_name=short_name, version=version, cloud_hosted=True
+        )
         if collections:
             return collections[0].concept_id()
         else:
@@ -902,7 +900,6 @@ def granules(self):
     # ----------------------------------------------------------------------
     # Methods - Get and display neatly information at the product level
 
-
     # ----------------------------------------------------------------------
     # Methods - Granules (NSIDC-API)
 

icepyx/core/granules.py

@@ -20,7 +20,6 @@
 from icepyx.core.types import (
     CMRParams,
     EGIRequiredParamsDownload,
-    EGIRequiredParamsSearch,
 )
 from icepyx.core.urls import DOWNLOAD_BASE_URL, GRANULE_SEARCH_BASE_URL, ORDER_BASE_URL
 
@@ -208,9 +207,7 @@ def get_avail(
         query.Query.avail_granules
         """
 
-        assert (
-            CMRparams is not None 
-        ), "Missing required input parameter dictionaries"
+        assert CMRparams is not None, "Missing required input parameter dictionaries"
 
         # if not hasattr(self, 'avail'):
         self.avail = []

icepyx/core/is2ref.py

@@ -11,10 +11,11 @@
 
 # ICESat-2 specific reference functions
 
+
 def _get_concept_id(product, version):
-    collections = earthaccess.search_datasets(short_name=product,
-                                              version=version,
-                                              cloud_hosted=True)
+    collections = earthaccess.search_datasets(
+        short_name=product, version=version, cloud_hosted=True
+    )
     if collections:
         return collections[0].concept_id()
 

icepyx/core/query.py

@@ -10,23 +10,21 @@
 can be renamed and the v1 versions removed.
 """
 
+import json
 from pathlib import Path
 from typing import Union
-import json
 
+import earthaccess
 from fsspec.utils import tempfile
 import harmony
-import earthaccess
 
-from icepyx.core.harmony import HarmonyApi, HarmonyTemporal
-from icepyx.core.base_query import BaseQuery
-import icepyx.core.temporal as tp
 import icepyx.core.APIformatting as apifmt
-
+from icepyx.core.base_query import BaseQuery
 from icepyx.core.granules import Granules, gran_IDs
-import icepyx.core.validate_inputs as val
-
+from icepyx.core.harmony import HarmonyApi, HarmonyTemporal
+import icepyx.core.temporal as tp
 from icepyx.core.types import CMRParams
+import icepyx.core.validate_inputs as val
 
 
 class Query(BaseQuery):
@@ -55,7 +53,6 @@ def __init__(self, *args, **kwargs):
                 self._prod, cycles=self.cycles, tracks=self.tracks
             )
 
-
     @property
     def cycles(self):
         """
@@ -96,11 +93,10 @@ def tracks(self):
         else:
             return sorted(set(self._tracks))
 
-
     def _get_concept_id(self, product, version) -> Union[str, None]:
-        collections = earthaccess.search_datasets(short_name=product,
-                                                  version=version,
-                                                  cloud_hosted=True)
+        collections = earthaccess.search_datasets(
+            short_name=product, version=version, cloud_hosted=True
+        )
         if collections:
             return collections[0].concept_id()
         else:
@@ -119,12 +115,10 @@ def show_custom_options(self) -> None:
 
         """
         if self.concept_id:
-
             capabilities = self.harmony_api.get_capabilities(concept_id=self.concept_id)
             print(json.dumps(capabilities, indent=2))
         return None
 
-
     @property
     def CMRparams(self) -> CMRParams:
         """
@@ -143,7 +137,6 @@ def CMRparams(self) -> CMRParams:
             self._CMRparams = apifmt.Parameters("CMR")
         # print(self._CMRparams)
         # print(self._CMRparams.fmted_keys)
-        
 
         # dictionary of optional CMR parameters
         kwargs = {}
@@ -168,7 +161,7 @@ def CMRparams(self) -> CMRParams:
             )
 
         return self._CMRparams.fmted_keys
-    
+
     @property
     def granules(self):
         """
@@ -257,16 +250,16 @@ def avail_granules(self, ids=False, cycles=False, tracks=False, cloud=False):
         else:
             return self.granules.avail
 
-
-
     def _order_subset_granules(self) -> str:
         concept_id = self._get_concept_id(
             product=self._prod,
             version=self._version,
         )
 
         if concept_id is None:
-            raise ValueError(f"Could not find concept ID for {self._prod} v{self._version}")
+            raise ValueError(
+                f"Could not find concept ID for {self._prod} v{self._version}"
+            )
 
         harmony_temporal = None
         if self._temporal:
@@ -317,15 +310,19 @@ def get_granule_links(self, cloud_hosted=False) -> list[str]:
         links = []
         for granule in self.granules.avail:
             for link in granule["links"]:
-                if cloud_hosted and link["rel"] == "http://esipfed.org/ns/fedsearch/1.1/s3#":
+                if (
+                    cloud_hosted
+                    and link["rel"] == "http://esipfed.org/ns/fedsearch/1.1/s3#"
+                ):
                     links.append(link["href"])
                 elif link["rel"] == "http://esipfed.org/ns/fedsearch/1.1/data#":
-                    if "type" in link and link["type"] in ["application/x-hdf5",
-                                                           "application/x-hdfeos"]:
+                    if "type" in link and link["type"] in [
+                        "application/x-hdf5",
+                        "application/x-hdfeos",
+                    ]:
                         links.append(link["href"])
         return links
 
-
     def _order_whole_granules(self, cloud_hosted=False, path="./") -> None:
         """
         Downloads the whole granules for the query object. This is not an asnc operation
@@ -340,11 +337,10 @@ def _order_whole_granules(self, cloud_hosted=False, path="./") -> None:
             The local directory to download the granules to.
 
         """
-        
+
         links = self.get_granule_links(cloud_hosted=cloud_hosted)
         earthaccess.download(links, local_path=path)
 
-
     def order_granules(self, subset=True):
         """
         Place an order for the available granules for the query object.

requirements.txt

@@ -1,6 +1,7 @@
 backoff
 dask[dataframe]
 datashader
+deprecated
 earthaccess>=0.12.0
 fiona
 geopandas
@@ -15,4 +16,3 @@ requests
 s3fs
 shapely
 xarray
-deprecated