config.toml

# This directory will host the data files
store = "~/.genescape"

# A versioned directory for the data files
tag = "v1.0.0"

# Minimum count
MINCOUNT = ""

# Default pattern in the interface
PATTERN = ''

# The title of the page
PAGE_TITLE = "GeneScape"

# The width of the sidebar
SIDEBAR_WIDTH = 300

# The background color of the sidebar
SIDEBAR_BG = "#f8f8f8"

# Default gene list.
GENE_LIST = """
CEACAM20
INPP5D
O60431
Q8IUC4
Q9UJF2
NEUROD2
O95905
ONECUT2
Q14119
P49459
POLK
UVRAG
"""

# A listing of the files used by GeneScape
[[files]]
target = "human.index.gz"
type = "index"
label = "Human"
code = "human"
package = 'genescape.data'

[[files]]
target = "mouse.index.gz"
type = "index"
label = "Mouse"
code = "mouse"
package = 'genescape.data'

[[files]]
target = "rat.index.gz"
type = "index"
label = "Rat"
code = "rat"
package = 'genescape.data'

[[files]]
target = "fly.index.gz"
type = "index"
label = "Fruitfly"
code = "fly"
package = 'genescape.data'

[[files]]
target = "zebrafish.index.gz"
type = "index"
label = "Zebrafish"
code = "zfish"
package = 'genescape.data'

[[files]]
target = "worm.index.gz"
type = "index"
label = "Worm"
code = "worm"
package = 'genescape.data'

[[files]]
target = "ecoli.index.gz"
type = "index"
label = "E.Coli"
code = "ecoli"
package = 'genescape.data'

[[files]]
target = "yeast.index.gz"
type = "index"
label = "Yeast"
code = "yeast"
package = 'genescape.data'

[[files]]
target = "arabidopsis.index.gz"
type = "index"
label = "Arabidopsis"
code = "arabidopsis"
package = 'genescape.data'

[[files]]
target = "go-basic.obo.gz"
package = "genescape.data"

[[files]]
target = "goa_human.gaf.gz"
package = "genescape.data"

[[files]]
target = "test_goids.txt"
package = "genescape.data"

[[files]]
target = "test_genes.txt"
package = "genescape.data"

[[files]]
target = "genescape.js"
subdir = ["js"]
package = "genescape.data.js"

[[files]]
target = "viz-standalone.js"
subdir = ["js"]
package = "genescape.data.js"

[[files]]
target = "genescape.css"
subdir = ["css"]
package = "genescape.data.css"