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converted gtf file is empty #120

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sumitra20 opened this issue Sep 20, 2023 · 1 comment
Open

converted gtf file is empty #120

sumitra20 opened this issue Sep 20, 2023 · 1 comment

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@sumitra20
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Hi,

I have a .gff file that was obtained from prokka. Converting the gff file into gtf format gives me file with no output. Im not sure if im going wrong somewhere. Any help will be appreciated. I'll attach the content of my gff file in txt format

gffread ./b.mega_hybrid.gff -T -o sequence.gtf

gff_file.txt

@gpertea
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gpertea commented Sep 20, 2023

Seems to work when I test that file here, I suspect you are using a rather old version of gffread? What does gffread --version say (if that option even works for that old version)?

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