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larrybabblarrybabb
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prep 2.0 pre-release snapshot
1 parent 8ee9a2e commit a6c429c

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+76
-76
lines changed

‎schema/vrs/json/Adjacency

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{
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"$schema": "https://json-schema.org/draft/2020-12/schema",
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"$id": "https://w3id.org/ga4gh/schema/vrs/2.0/json/Adjacency",
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"$id": "https://w3id.org/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/Adjacency",
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"title": "Adjacency",
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"type": "object",
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"maturity": "trial use",
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"type": "array",
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"ordered": false,
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"items": {
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"$ref": "/ga4gh/schema/vrs/2.0/json/Expression"
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"$ref": "/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/Expression"
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}
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},
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"type": {
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"items": {
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"oneOf": [
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{
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"$ref": "/ga4gh/schema/vrs/2.0/json/SequenceLocation"
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"$ref": "/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/SequenceLocation"
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},
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{
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"$ref": "/ga4gh/schema/gks-core/1.0.0-snapshot.2025-02.1/json/iriReference"
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"description": "The sequence found between adjoined sequences.",
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"oneOf": [
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{
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"$ref": "/ga4gh/schema/vrs/2.0/json/LengthExpression"
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"$ref": "/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/LengthExpression"
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},
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{
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"$ref": "/ga4gh/schema/vrs/2.0/json/LiteralSequenceExpression"
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"$ref": "/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/LiteralSequenceExpression"
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},
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{
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"$ref": "/ga4gh/schema/vrs/2.0/json/ReferenceLengthExpression"
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"$ref": "/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/ReferenceLengthExpression"
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}
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]
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},

‎schema/vrs/json/Allele

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{
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"$schema": "https://json-schema.org/draft/2020-12/schema",
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"$id": "https://w3id.org/ga4gh/schema/vrs/2.0/json/Allele",
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"$id": "https://w3id.org/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/Allele",
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"title": "Allele",
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"type": "object",
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"maturity": "trial use",
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"type": "array",
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"ordered": false,
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"items": {
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"$ref": "/ga4gh/schema/vrs/2.0/json/Expression"
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"$ref": "/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/Expression"
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}
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},
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"type": {
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"location": {
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"oneOf": [
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{
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"$ref": "/ga4gh/schema/vrs/2.0/json/SequenceLocation"
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"$ref": "/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/SequenceLocation"
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},
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{
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"$ref": "/ga4gh/schema/gks-core/1.0.0-snapshot.2025-02.1/json/iriReference"
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"description": "An expression of the sequence state",
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"oneOf": [
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{
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"$ref": "/ga4gh/schema/vrs/2.0/json/LengthExpression"
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"$ref": "/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/LengthExpression"
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},
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{
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"$ref": "/ga4gh/schema/vrs/2.0/json/LiteralSequenceExpression"
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"$ref": "/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/LiteralSequenceExpression"
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},
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{
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"$ref": "/ga4gh/schema/vrs/2.0/json/ReferenceLengthExpression"
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"$ref": "/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/ReferenceLengthExpression"
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}
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]
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}

‎schema/vrs/json/CisPhasedBlock

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{
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"$schema": "https://json-schema.org/draft/2020-12/schema",
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"$id": "https://w3id.org/ga4gh/schema/vrs/2.0/json/CisPhasedBlock",
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"$id": "https://w3id.org/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/CisPhasedBlock",
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"title": "CisPhasedBlock",
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"type": "object",
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"maturity": "trial use",
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"type": "array",
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"ordered": false,
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"items": {
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"$ref": "/ga4gh/schema/vrs/2.0/json/Expression"
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"$ref": "/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/Expression"
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}
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},
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"type": {
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"items": {
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"oneOf": [
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{
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"$ref": "/ga4gh/schema/vrs/2.0/json/Allele"
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"$ref": "/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/Allele"
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},
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{
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"$ref": "/ga4gh/schema/gks-core/1.0.0-snapshot.2025-02.1/json/iriReference"
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"description": "A list of Alleles that are found in-cis on a shared molecule."
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},
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"sequenceReference": {
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"$ref": "/ga4gh/schema/vrs/2.0/json/SequenceReference",
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"$ref": "/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/SequenceReference",
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"description": "An optional Sequence Reference on which all of the in-cis Alleles are found. When defined, this may be used to implicitly define the `sequenceReference` attribute for each of the CisPhasedBlock member Alleles."
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}
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},

‎schema/vrs/json/CopyNumberChange

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{
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"$schema": "https://json-schema.org/draft/2020-12/schema",
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"$id": "https://w3id.org/ga4gh/schema/vrs/2.0/json/CopyNumberChange",
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"$id": "https://w3id.org/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/CopyNumberChange",
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"title": "CopyNumberChange",
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"type": "object",
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"maturity": "draft",
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"type": "array",
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"ordered": false,
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"items": {
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"$ref": "/ga4gh/schema/vrs/2.0/json/Expression"
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"$ref": "/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/Expression"
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}
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},
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"type": {
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"location": {
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"oneOf": [
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{
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"$ref": "/ga4gh/schema/vrs/2.0/json/SequenceLocation"
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"$ref": "/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/SequenceLocation"
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},
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{
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"$ref": "/ga4gh/schema/gks-core/1.0.0-snapshot.2025-02.1/json/iriReference"

‎schema/vrs/json/CopyNumberCount

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{
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"$schema": "https://json-schema.org/draft/2020-12/schema",
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"$id": "https://w3id.org/ga4gh/schema/vrs/2.0/json/CopyNumberCount",
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"$id": "https://w3id.org/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/CopyNumberCount",
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"title": "CopyNumberCount",
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"type": "object",
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"maturity": "trial use",
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"type": "array",
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"ordered": false,
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"items": {
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"$ref": "/ga4gh/schema/vrs/2.0/json/Expression"
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"$ref": "/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/Expression"
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}
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},
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"type": {
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"location": {
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"oneOf": [
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{
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"$ref": "/ga4gh/schema/vrs/2.0/json/SequenceLocation"
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"$ref": "/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/SequenceLocation"
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},
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{
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"$ref": "/ga4gh/schema/gks-core/1.0.0-snapshot.2025-02.1/json/iriReference"
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"copies": {
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"oneOf": [
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{
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"$ref": "/ga4gh/schema/vrs/2.0/json/Range"
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"$ref": "/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/Range"
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},
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{
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"type": "integer"

‎schema/vrs/json/DerivativeMolecule

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{
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"$schema": "https://json-schema.org/draft/2020-12/schema",
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"$id": "https://w3id.org/ga4gh/schema/vrs/2.0/json/DerivativeMolecule",
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"$id": "https://w3id.org/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/DerivativeMolecule",
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"title": "DerivativeMolecule",
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"type": "object",
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"maturity": "draft",
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"type": "array",
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"ordered": false,
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"items": {
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"$ref": "/ga4gh/schema/vrs/2.0/json/Expression"
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"$ref": "/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/Expression"
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}
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},
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"type": {
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"items": {
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"oneOf": [
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{
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"$ref": "/ga4gh/schema/vrs/2.0/json/Allele"
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"$ref": "/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/Allele"
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},
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{
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"$ref": "/ga4gh/schema/vrs/2.0/json/CisPhasedBlock"
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"$ref": "/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/CisPhasedBlock"
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},
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{
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"$ref": "/ga4gh/schema/vrs/2.0/json/Terminus"
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"$ref": "/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/Terminus"
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},
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{
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"$ref": "/ga4gh/schema/vrs/2.0/json/TraversalBlock"
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"$ref": "/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/TraversalBlock"
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},
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{
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"$ref": "/ga4gh/schema/gks-core/1.0.0-snapshot.2025-02.1/json/iriReference"

‎schema/vrs/json/Expression

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{
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"$schema": "https://json-schema.org/draft/2020-12/schema",
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"$id": "https://w3id.org/ga4gh/schema/vrs/2.0/json/Expression",
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"$id": "https://w3id.org/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/Expression",
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"title": "Expression",
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"type": "object",
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"maturity": "trial use",

‎schema/vrs/json/LengthExpression

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{
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"$schema": "https://json-schema.org/draft/2020-12/schema",
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"$id": "https://w3id.org/ga4gh/schema/vrs/2.0/json/LengthExpression",
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"$id": "https://w3id.org/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/LengthExpression",
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"title": "LengthExpression",
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"type": "object",
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"maturity": "draft",
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"description": "The length of the sequence.",
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"oneOf": [
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{
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"$ref": "/ga4gh/schema/vrs/2.0/json/Range"
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"$ref": "/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/Range"
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},
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{
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"type": "integer"

‎schema/vrs/json/LiteralSequenceExpression

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{
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"$schema": "https://json-schema.org/draft/2020-12/schema",
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"$id": "https://w3id.org/ga4gh/schema/vrs/2.0/json/LiteralSequenceExpression",
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"$id": "https://w3id.org/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/LiteralSequenceExpression",
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"title": "LiteralSequenceExpression",
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"type": "object",
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"maturity": "trial use",
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"default": "LiteralSequenceExpression"
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},
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"sequence": {
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"$ref": "/ga4gh/schema/vrs/2.0/json/sequenceString",
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"$ref": "/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/sequenceString",
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"description": "the literal sequence"
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}
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},

‎schema/vrs/json/Location

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{
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"$schema": "https://json-schema.org/draft/2020-12/schema",
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"$id": "https://w3id.org/ga4gh/schema/vrs/2.0/json/Location",
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"$id": "https://w3id.org/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/Location",
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"title": "Location",
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"type": "object",
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"maturity": "trial use",
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"description": "A contiguous segment of a biological sequence.",
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"oneOf": [
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{
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"$ref": "/ga4gh/schema/vrs/2.0/json/SequenceLocation"
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"$ref": "/ga4gh/schema/vrs/2.0.0-snapshot.2025-02.1/json/SequenceLocation"
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}
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],
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"discriminator": {

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